Variant report

No.	Distal block	Cell Line	Cell type
1	chr16:71533954..71535793-chr16:71540194..71541859,2	K562	blood:
2	chr16:71540507..71541058-chr16:71644975..71645549,2	K562	blood:
3	chr16:71539599..71541641-chr16:71558736..71562007,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000140835	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12447033	0.82[AMR][1000 genomes]
rs12708914	0.87[EUR][1000 genomes]
rs12919417	0.80[AFR][1000 genomes]
rs12922775	0.82[AMR][1000 genomes]
rs12927006	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12927456	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17280181	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17345863	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17347255	0.82[AMR][1000 genomes]
rs34015581	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34181942	0.82[AMR][1000 genomes]
rs34380814	0.92[EUR][1000 genomes]
rs34766979	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34849731	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35837657	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35981926	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs36122765	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs71403847	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs71403849	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7195767	0.87[EUR][1000 genomes]
rs7203606	0.84[AMR][1000 genomes]
rs8051974	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949461	chr16:71196153-71579711	ZNF genes & repeats Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
2	nsv906892	chr16:71526720-71570413	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:71537800-71543200	Weak transcription	Pancreas	Pancrea

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