Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1015964	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10431730	0.81[EUR][1000 genomes]
rs10483907	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11159362	0.83[EUR][1000 genomes]
rs1122840	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1122841	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1122842	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1122898	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11622820	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11625200	0.82[EUR][1000 genomes]
rs11625544	0.80[EUR][1000 genomes]
rs11844960	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12588305	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1468743	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1990531	0.83[EUR][1000 genomes]
rs2098518	0.91[EUR][1000 genomes]
rs2193670	0.92[EUR][1000 genomes]
rs4903768	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4903776	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4903777	0.92[EUR][1000 genomes]
rs4903779	0.92[EUR][1000 genomes]
rs59161552	0.83[EUR][1000 genomes]
rs7150018	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760000	chr14:78875607-79173528	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2758363	chr14:78903610-79173528	Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1037999	chr14:78966643-79026875	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78975800-78976200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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