Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1015964	0.82[EUR][1000 genomes]
rs10431730	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10483907	0.82[EUR][1000 genomes]
rs11159362	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1122840	0.89[EUR][1000 genomes]
rs1122841	0.83[EUR][1000 genomes]
rs1122842	0.83[EUR][1000 genomes]
rs1122898	0.83[EUR][1000 genomes]
rs11622820	0.87[EUR][1000 genomes]
rs11625200	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11625544	0.82[AFR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11844960	0.82[EUR][1000 genomes]
rs12588305	0.83[EUR][1000 genomes]
rs1468743	0.87[EUR][1000 genomes]
rs17829186	0.82[ASN][1000 genomes]
rs1990531	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2098518	0.86[EUR][1000 genomes]
rs2193670	0.87[EUR][1000 genomes]
rs35810359	0.83[EUR][1000 genomes]
rs4899711	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4903768	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4903776	0.82[EUR][1000 genomes]
rs4903777	0.89[EUR][1000 genomes]
rs4903779	0.88[EUR][1000 genomes]
rs72681556	0.82[AFR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832837	chr14:78766805-78946526	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv2760000	chr14:78875607-79173528	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2758363	chr14:78903610-79173528	Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78942800-78950600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr14:78945200-78946200	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr14:78945600-78946000	Enhancers	HUES64 Cell Line	embryonic stem cell

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