The 2.0 version of rSNPBase

Variant report

Variant rs35908685
Chromosome Location chr11:36680846-36680847
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:36630600-36682000 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr11:36641400-36681000 Weak transcription Primary T cells from cord blood blood
3 chr11:36642000-36681000 Weak transcription Fetal Kidney kidney
4 chr11:36648600-36681400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr11:36650600-36687000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr11:36650800-36682600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:36651000-36684000 Weak transcription HSMMtube muscle
8 chr11:36653800-36684400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr11:36660800-36685800 Weak transcription Fetal Stomach stomach
10 chr11:36661400-36681200 Weak transcription Gastric stomach
11 chr11:36661600-36681200 Weak transcription Colon Smooth Muscle Colon
12 chr11:36666800-36692800 Weak transcription Fetal Heart heart
13 chr11:36668000-36683800 Weak transcription Brain Germinal Matrix brain
14 chr11:36668200-36681000 Weak transcription Brain Hippocampus Middle brain
15 chr11:36669800-36685600 Weak transcription Fetal Muscle Leg muscle
16 chr11:36670200-36682600 Weak transcription Brain Cingulate Gyrus brain
17 chr11:36670600-36682800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr11:36670800-36683600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr11:36671000-36683800 Weak transcription Fetal Muscle Trunk muscle
20 chr11:36671800-36681400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr11:36679400-36682800 Weak transcription Brain Angular Gyrus brain
22 chr11:36679600-36682400 Weak transcription Fetal Brain Male brain
23 chr11:36679600-36687000 Weak transcription K562 blood
24 chr11:36680400-36681200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr11:36680600-36681000 Strong transcription Fetal Intestine Large intestine
26 chr11:36680600-36681200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr11:36680600-36681200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:36680600-36681200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
29 chr11:36680600-36681200 ZNF genes & repeats Adipose Nuclei Adipose
30 chr11:36680600-36681200 Strong transcription Stomach Smooth Muscle stomach
31 chr11:36680600-36681400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr11:36680600-36681400 ZNF genes & repeats Primary hematopoietic stem cells blood
33 chr11:36680600-36681600 ZNF genes & repeats Dnd41 blood
34 chr11:36680600-36682000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
35 chr11:36680600-36682200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
36 chr11:36680600-36682200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr11:36680600-36682200 ZNF genes & repeats Liver Liver
38 chr11:36680600-36682200 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr11:36680600-36682200 Strong transcription Fetal Lung lung
40 chr11:36680800-36681000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
41 chr11:36680800-36681000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
42 chr11:36680800-36681000 ZNF genes & repeats Aorta Aorta
43 chr11:36680800-36681000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
44 chr11:36680800-36681200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
45 chr11:36680800-36681200 ZNF genes & repeats Duodenum Mucosa Duodenum
46 chr11:36680800-36681200 ZNF genes & repeats Left Ventricle heart
47 chr11:36680800-36681200 ZNF genes & repeats Ovary ovary
48 chr11:36680800-36681200 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
49 chr11:36680800-36681200 ZNF genes & repeats Thymus Thymus
50 chr11:36680800-36681600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015