Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11174201	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11174204	0.93[ASN][1000 genomes]
rs11174207	0.81[AMR][1000 genomes]
rs12423224	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12424427	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12579684	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12581426	0.93[ASN][1000 genomes]
rs12813362	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12815579	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12816097	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12818949	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12821294	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17125406	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17605016	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2061205	0.94[ASN][1000 genomes]
rs34677376	0.82[EUR][1000 genomes]
rs35150293	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35846182	0.80[EUR][1000 genomes]
rs7136585	0.95[ASN][1000 genomes]
rs71465106	0.82[EUR][1000 genomes]
rs71465109	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7397172	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7488706	0.82[EUR][1000 genomes]
rs7488978	0.82[EUR][1000 genomes]
rs7954960	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv899151	chr12:62108648-62227606	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62196800-62198600	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr12:62197000-62198600	Enhancers	iPS-18 Cell Line	embryonic stem cell

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