The 2.0 version of rSNPBase

Variant report

Variant rs35940731
Chromosome Location chr3:56715168-56715169
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56675800-56716200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:56684400-56715200 Weak transcription Fetal Heart heart
3 chr3:56695400-56716000 Weak transcription Fetal Brain Male brain
4 chr3:56695600-56715600 Weak transcription Stomach Mucosa stomach
5 chr3:56699600-56716000 Weak transcription Fetal Kidney kidney
6 chr3:56699600-56716200 Weak transcription Spleen Spleen
7 chr3:56699800-56716000 Weak transcription Aorta Aorta
8 chr3:56701800-56716000 Weak transcription Psoas Muscle Psoas
9 chr3:56702400-56715400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr3:56702400-56716200 Weak transcription Small Intestine intestine
11 chr3:56702600-56715800 Weak transcription Stomach Smooth Muscle stomach
12 chr3:56702600-56716000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:56702600-56716000 Weak transcription Colonic Mucosa Colon
14 chr3:56702800-56715800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr3:56703000-56716200 Weak transcription Ovary ovary
16 chr3:56703200-56716000 Weak transcription Placenta Amnion Placenta Amnion
17 chr3:56703600-56715400 Weak transcription Brain Hippocampus Middle brain
18 chr3:56704800-56715600 Weak transcription HSMMtube muscle
19 chr3:56704800-56715800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr3:56704800-56716000 Weak transcription Brain Germinal Matrix brain
21 chr3:56704800-56716200 Weak transcription Left Ventricle heart
22 chr3:56705200-56715200 Weak transcription Thymus Thymus
23 chr3:56705200-56716000 Weak transcription Fetal Lung lung
24 chr3:56705200-56716000 Weak transcription Fetal Muscle Trunk muscle
25 chr3:56705200-56716200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr3:56705400-56715400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr3:56705400-56716000 Weak transcription H9 Cell Line embryonic stem cell
28 chr3:56705400-56716000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr3:56705400-56716200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr3:56705400-56716200 Weak transcription Gastric stomach
31 chr3:56705800-56715400 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr3:56705800-56715400 Weak transcription Primary hematopoietic stem cells blood
33 chr3:56706200-56715800 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr3:56707200-56715200 Weak transcription H1 Cell Line embryonic stem cell
35 chr3:56707200-56715400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr3:56707200-56716000 Weak transcription Fetal Intestine Large intestine
37 chr3:56707200-56716200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr3:56707200-56716200 Weak transcription Esophagus oesophagus
39 chr3:56707400-56715200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr3:56707400-56715200 Weak transcription Rectal Smooth Muscle rectum
41 chr3:56707400-56715400 Weak transcription Brain Anterior Caudate brain
42 chr3:56707400-56716000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:56707400-56716000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr3:56707400-56716000 Weak transcription Fetal Intestine Small intestine
45 chr3:56708000-56715400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr3:56709600-56715400 Enhancers Primary T helper naive cells from peripheral blood blood
47 chr3:56709800-56715400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr3:56710000-56715200 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr3:56710800-56715400 Enhancers Primary T helper cells fromperipheralblood blood
50 chr3:56711000-56715600 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015