Variant report

Variant	rs36076510
Chromosome Location	chr4:107483673-107483674
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs12854568	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12855057	0.83[EUR][1000 genomes]
rs12864687	1.00[EUR][1000 genomes]
rs12865759	1.00[AFR][1000 genomes]
rs12869734	1.00[AFR][1000 genomes]
rs12871110	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12871876	1.00[AFR][1000 genomes]
rs12873529	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12874078	0.83[EUR][1000 genomes]
rs12874625	0.92[EUR][1000 genomes]
rs12874656	0.92[EUR][1000 genomes]
rs12875735	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12876085	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12876767	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12877979	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34004765	1.00[AFR][1000 genomes]
rs34022722	1.00[AFR][1000 genomes]
rs34037601	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34240704	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34322289	1.00[AFR][1000 genomes]
rs34453614	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34669502	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34708656	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34719909	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs34749343	0.83[EUR][1000 genomes]
rs35243013	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs35254585	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs35352976	1.00[AFR][1000 genomes]
rs35609677	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs35629298	1.00[AFR][1000 genomes]
rs35919197	0.83[EUR][1000 genomes]
rs35970869	1.00[AFR][1000 genomes]
rs36048472	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs71427543	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71427545	0.83[EUR][1000 genomes]
rs71427549	0.83[EUR][1000 genomes]
rs71427550	0.83[EUR][1000 genomes]
rs71427551	0.83[EUR][1000 genomes]
rs71427552	0.83[EUR][1000 genomes]
rs71427553	0.83[EUR][1000 genomes]
rs71427554	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs71427573	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879706	chr4:107477804-107546665	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107470400-107485800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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