Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81443218..81445707-chr14:81448649..81450326,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NRXN3-4	chr14:81448332-81449982	NONHSAT038046

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10145099	0.88[ASN][1000 genomes]
rs1023586	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11159479	0.86[ASN][1000 genomes]
rs12101255	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12101261	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17111346	0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2160215	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2268459	0.86[ASN][1000 genomes]
rs2284726	0.88[ASN][1000 genomes]
rs2300516	0.88[ASN][1000 genomes]
rs2371463	0.88[ASN][1000 genomes]
rs28414437	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3783948	0.88[ASN][1000 genomes]
rs3783949	0.89[ASN][1000 genomes]
rs3783950	0.80[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs4903961	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56389234	0.86[ASN][1000 genomes]
rs6574617	0.86[ASN][1000 genomes]
rs724170	0.88[ASN][1000 genomes]
rs8003061	0.91[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs8003515	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv2761847	chr14:81392124-81453137	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81447000-81451000	Genic enhancers	Dnd41	blood
2	chr14:81448000-81453400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr14:81448000-81453400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr14:81449200-81452600	Enhancers	Thymus	Thymus
5	chr14:81449400-81450800	Weak transcription	Fetal Thymus	thymus

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