The 2.0 version of rSNPBase

Variant report

Variant rs3813682
Chromosome Location chr6:24797815-24797816
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24776400-24803200 Weak transcription HSMMtube muscle
2 chr6:24776400-24807400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr6:24776800-24807600 Weak transcription Placenta Amnion Placenta Amnion
4 chr6:24777000-24801200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr6:24777000-24802400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr6:24777000-24805000 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr6:24777000-24806200 Weak transcription Spleen Spleen
8 chr6:24777000-24808000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr6:24777000-24809400 Weak transcription Brain Germinal Matrix brain
10 chr6:24777000-24811600 Weak transcription Brain Hippocampus Middle brain
11 chr6:24777000-24847600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr6:24777000-24859600 Weak transcription Psoas Muscle Psoas
13 chr6:24777200-24802400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr6:24777200-24802400 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr6:24777600-24802400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr6:24781000-24802400 Weak transcription Muscle Satellite Cultured Cells --
17 chr6:24782400-24803000 Weak transcription Pancreas Pancrea
18 chr6:24783400-24802000 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr6:24783600-24802400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr6:24785000-24801200 Weak transcription Primary B cells from peripheral blood blood
21 chr6:24785000-24802000 Weak transcription Primary T cells fromperipheralblood blood
22 chr6:24786400-24798000 Weak transcription Brain Anterior Caudate brain
23 chr6:24786400-24799800 Weak transcription Osteobl bone
24 chr6:24786600-24799600 Weak transcription Hela-S3 cervix
25 chr6:24787600-24798600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:24787600-24799000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr6:24787600-24801400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr6:24787600-24806200 Weak transcription Fetal Stomach stomach
29 chr6:24787800-24798800 Weak transcription HepG2 liver
30 chr6:24787800-24802000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr6:24787800-24802600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:24787800-24802600 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr6:24788000-24805600 Weak transcription Fetal Muscle Leg muscle
34 chr6:24788000-24810200 Weak transcription Left Ventricle heart
35 chr6:24788000-24832000 Weak transcription Brain Substantia Nigra brain
36 chr6:24788200-24799600 Weak transcription Liver Liver
37 chr6:24788200-24802400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:24788600-24800800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr6:24788800-24848200 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr6:24789000-24799000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:24789000-24799400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr6:24789000-24801000 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr6:24789000-24802400 Weak transcription HSMM muscle
44 chr6:24789000-24807000 Weak transcription GM12878-XiMat blood
45 chr6:24789200-24799000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr6:24789200-24800800 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr6:24789200-24801200 Weak transcription Primary monocytes fromperipheralblood blood
48 chr6:24789200-24805800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr6:24789200-24807400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr6:24789200-24842600 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015