Variant report

Variant rs6456635
Chromosome Location chr6:24778195-24778196
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24774200-24778200 Active TSS K562 blood
2 chr6:24774400-24778400 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr6:24774600-24779200 Active TSS Pancreatic Islets Pancreatic Islet
4 chr6:24774600-24780400 Active TSS Fetal Stomach stomach
5 chr6:24775000-24778200 Active TSS GM12878-XiMat blood
6 chr6:24775800-24780400 Transcr. at gene 5' and 3' Dnd41 blood
7 chr6:24776200-24782000 Weak transcription Fetal Brain Male brain
8 chr6:24776200-24787000 Weak transcription Aorta Aorta
9 chr6:24776400-24803200 Weak transcription HSMMtube muscle
10 chr6:24776400-24807400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr6:24776600-24778200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr6:24776600-24778400 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
13 chr6:24776600-24786800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr6:24776800-24788000 Weak transcription Colon Smooth Muscle Colon
15 chr6:24776800-24788400 Weak transcription Esophagus oesophagus
16 chr6:24776800-24790600 Weak transcription Right Ventricle heart
17 chr6:24776800-24807600 Weak transcription Placenta Amnion Placenta Amnion
18 chr6:24777000-24778400 Weak transcription Left Ventricle heart
19 chr6:24777000-24778400 Weak transcription Pancreas Pancrea
20 chr6:24777000-24778400 Weak transcription Rectal Smooth Muscle rectum
21 chr6:24777000-24778400 Active TSS HMEC breast
22 chr6:24777000-24778800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:24777000-24779200 Weak transcription Liver Liver
24 chr6:24777000-24779200 Active TSS Rectal Mucosa Donor 31 rectum
25 chr6:24777000-24779200 Weak transcription Small Intestine intestine
26 chr6:24777000-24779200 Enhancers Stomach Mucosa stomach
27 chr6:24777000-24779800 Weak transcription Primary B cells from peripheral blood blood
28 chr6:24777000-24779800 Weak transcription Fetal Lung lung
29 chr6:24777000-24780400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr6:24777000-24780800 Weak transcription H9 Cell Line embryonic stem cell
31 chr6:24777000-24781000 Weak transcription Fetal Muscle Leg muscle
32 chr6:24777000-24781000 Weak transcription Thymus Thymus
33 chr6:24777000-24781200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr6:24777000-24781600 Weak transcription Primary monocytes fromperipheralblood blood
35 chr6:24777000-24781600 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr6:24777000-24781800 Weak transcription Placenta Placenta
37 chr6:24777000-24782000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:24777000-24782000 Weak transcription Lung lung
39 chr6:24777000-24782200 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr6:24777000-24784400 Weak transcription Primary T cells fromperipheralblood blood
41 chr6:24777000-24786000 Weak transcription Brain Substantia Nigra brain
42 chr6:24777000-24786000 Weak transcription Fetal Muscle Trunk muscle
43 chr6:24777000-24786400 Weak transcription Ovary ovary
44 chr6:24777000-24787000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr6:24777000-24787000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr6:24777000-24788400 Weak transcription Colonic Mucosa Colon
47 chr6:24777000-24788800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:24777000-24789000 Weak transcription Gastric stomach
49 chr6:24777000-24790800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr6:24777000-24791000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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