Variant report
| Variant | rs3885883 |
|---|---|
| Chromosome Location | chr1:59266115-59266116 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:59251400-59275000 | Weak transcription | Ovary | ovary |
| 2 | chr1:59251400-59279200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 3 | chr1:59251800-59277200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 4 | chr1:59251800-59278200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 5 | chr1:59252800-59268600 | Weak transcription | Pancreas | Pancrea |
| 6 | chr1:59253000-59278000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 7 | chr1:59254000-59281000 | Weak transcription | Brain Substantia Nigra | brain |
| 8 | chr1:59254400-59271600 | Weak transcription | Primary T cells from cord blood | blood |
| 9 | chr1:59257000-59271400 | Weak transcription | Esophagus | oesophagus |
| 10 | chr1:59257200-59278000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 11 | chr1:59260200-59277800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 12 | chr1:59260600-59275200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 13 | chr1:59260600-59278000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 14 | chr1:59261000-59270600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 15 | chr1:59261600-59268600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr1:59261600-59271000 | Weak transcription | Primary B cells from cord blood | blood |
| 17 | chr1:59261800-59270000 | Weak transcription | Psoas Muscle | Psoas |
| 18 | chr1:59262400-59268000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 19 | chr1:59262400-59274600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 20 | chr1:59262600-59267600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr1:59263400-59278200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 22 | chr1:59264600-59268400 | Weak transcription | Fetal Intestine Small | intestine |
| 23 | chr1:59264800-59275000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr1:59265000-59266400 | Enhancers | Stomach Mucosa | stomach |
| 25 | chr1:59265000-59280400 | Weak transcription | Brain Hippocampus Middle | brain |
| 26 | chr1:59265200-59268000 | Weak transcription | Fetal Intestine Large | intestine |
| 27 | chr1:59265400-59278600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 28 | chr1:59265400-59279200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
