Variant report

Variant	rs3901336
Chromosome Location	chr13:50406414-50406415
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1008939	0.80[AFR][1000 genomes];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12019576	0.82[EUR][1000 genomes]
rs7324563	0.88[EUR][1000 genomes]
rs7328465	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7982919	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7983049	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7996689	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9316478	0.88[EUR][1000 genomes]
rs9526606	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9535346	0.83[EUR][1000 genomes]
rs9535360	0.90[EUR][1000 genomes]
rs9535361	0.90[EUR][1000 genomes]
rs9535362	0.88[EUR][1000 genomes]
rs9535366	0.88[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:50396000-50414400	Weak transcription	Right Atrium	heart
2	chr13:50402200-50412800	Weak transcription	Fetal Intestine Small	intestine
3	chr13:50403000-50410200	Weak transcription	HepG2	liver
4	chr13:50404000-50410600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr13:50405800-50414200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr13:50406000-50410400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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