Variant report

Variant	rs9535366
Chromosome Location	chr13:50416303-50416304
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1008939	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12019576	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1407439	0.88[CHB][hapmap]
rs3742096	0.88[CHB][hapmap];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3901336	0.88[EUR][1000 genomes]
rs58303577	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs61961485	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs61961487	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7324563	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7326209	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7328465	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7332209	0.88[CHB][hapmap]
rs7982919	0.88[CHB][hapmap];0.86[EUR][1000 genomes]
rs7983049	0.88[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7996689	0.88[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9316478	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9526606	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9535318	0.84[AMR][1000 genomes]
rs9535320	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9535323	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9535325	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9535327	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9535346	0.88[CHB][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9535351	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs9535360	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9535361	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9535362	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs957474	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:50411400-50422000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr13:50413000-50421600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr13:50413400-50418600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr13:50415000-50418200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr13:50415000-50418400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr13:50415000-50420600	Weak transcription	K562	blood
7	chr13:50415400-50421600	Weak transcription	HepG2	liver
8	chr13:50415400-50421800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr13:50415600-50421800	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr13:50416200-50416400	Enhancers	Osteobl	bone
11	chr13:50416200-50416600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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