The 2.0 version of rSNPBase

Variant report

Variant rs393558
Chromosome Location chr6:167397750-167397751
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:167371400-167411000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:167373600-167402400 Weak transcription Liver Liver
3 chr6:167378800-167398600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:167381200-167410000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr6:167381200-167411000 Weak transcription Fetal Stomach stomach
6 chr6:167382000-167411200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:167382400-167402200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr6:167383200-167411200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:167383400-167411000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr6:167384000-167410600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr6:167384000-167411000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr6:167384000-167411000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr6:167384400-167401400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr6:167384400-167407400 Weak transcription Fetal Intestine Large intestine
15 chr6:167384400-167411000 Weak transcription Fetal Muscle Leg muscle
16 chr6:167384600-167398600 Weak transcription H1 Cell Line embryonic stem cell
17 chr6:167384600-167402800 Weak transcription Primary B cells from peripheral blood blood
18 chr6:167384600-167409600 Weak transcription Primary monocytes fromperipheralblood blood
19 chr6:167384800-167399200 Weak transcription Primary B cells from cord blood blood
20 chr6:167385000-167402000 Weak transcription Fetal Intestine Small intestine
21 chr6:167385000-167402200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr6:167385000-167411000 Weak transcription Thymus Thymus
23 chr6:167385200-167401400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr6:167385400-167401000 Weak transcription Primary T cells from cord blood blood
25 chr6:167385400-167402200 Weak transcription HMEC breast
26 chr6:167385400-167403000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:167385400-167405800 Weak transcription Primary hematopoietic stem cells blood
28 chr6:167385400-167411000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr6:167386200-167401600 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:167386200-167409400 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr6:167386600-167401600 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr6:167386600-167402000 Weak transcription NHEK skin
33 chr6:167386800-167401600 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr6:167387600-167398400 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr6:167387600-167398400 Weak transcription Fetal Thymus thymus
36 chr6:167387600-167402000 Weak transcription Primary T cells fromperipheralblood blood
37 chr6:167387800-167401800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr6:167388800-167401400 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr6:167388800-167410600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr6:167389600-167411000 Weak transcription NHLF lung
41 chr6:167389800-167402400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:167390400-167398600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr6:167390600-167411200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:167390800-167411000 Weak transcription Gastric stomach
45 chr6:167391400-167398600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr6:167392200-167399600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr6:167392200-167411000 Weak transcription Muscle Satellite Cultured Cells --
48 chr6:167392400-167402000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr6:167392600-167410800 Weak transcription HUVEC blood vessel
50 chr6:167394200-167401400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015