The 2.0 version of rSNPBase

Variant report

Variant rs408080
Chromosome Location chr6:167392522-167392523
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:167371400-167411000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:167373600-167402400 Weak transcription Liver Liver
3 chr6:167378800-167398600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:167381200-167410000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr6:167381200-167411000 Weak transcription Fetal Stomach stomach
6 chr6:167381800-167396200 Weak transcription HepG2 liver
7 chr6:167382000-167411200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:167382400-167402200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr6:167383200-167396200 Weak transcription Fetal Brain Female brain
10 chr6:167383200-167411200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr6:167383400-167411000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr6:167384000-167396200 Weak transcription GM12878-XiMat blood
13 chr6:167384000-167410600 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr6:167384000-167411000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr6:167384000-167411000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:167384400-167401400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr6:167384400-167407400 Weak transcription Fetal Intestine Large intestine
18 chr6:167384400-167411000 Weak transcription Fetal Muscle Leg muscle
19 chr6:167384600-167396200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:167384600-167398600 Weak transcription H1 Cell Line embryonic stem cell
21 chr6:167384600-167402800 Weak transcription Primary B cells from peripheral blood blood
22 chr6:167384600-167409600 Weak transcription Primary monocytes fromperipheralblood blood
23 chr6:167384800-167399200 Weak transcription Primary B cells from cord blood blood
24 chr6:167385000-167402000 Weak transcription Fetal Intestine Small intestine
25 chr6:167385000-167402200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr6:167385000-167411000 Weak transcription Thymus Thymus
27 chr6:167385200-167401400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr6:167385400-167401000 Weak transcription Primary T cells from cord blood blood
29 chr6:167385400-167402200 Weak transcription HMEC breast
30 chr6:167385400-167403000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr6:167385400-167405800 Weak transcription Primary hematopoietic stem cells blood
32 chr6:167385400-167411000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:167386200-167401600 Weak transcription H9 Cell Line embryonic stem cell
34 chr6:167386200-167409400 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr6:167386600-167396400 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr6:167386600-167401600 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr6:167386600-167402000 Weak transcription NHEK skin
38 chr6:167386800-167401600 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr6:167387600-167398400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr6:167387600-167398400 Weak transcription Fetal Thymus thymus
41 chr6:167387600-167402000 Weak transcription Primary T cells fromperipheralblood blood
42 chr6:167387800-167401800 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr6:167388800-167401400 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr6:167388800-167410600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr6:167389600-167411000 Weak transcription NHLF lung
46 chr6:167389800-167402400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:167390200-167396200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr6:167390400-167398600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr6:167390600-167411200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr6:167390800-167411000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015