The 2.0 version of rSNPBase

Variant report

Variant rs397713
Chromosome Location chr6:167386714-167386715
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:167371400-167411000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:167373600-167402400 Weak transcription Liver Liver
3 chr6:167378800-167398600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:167380800-167391000 Weak transcription Osteobl bone
5 chr6:167381200-167410000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:167381200-167411000 Weak transcription Fetal Stomach stomach
7 chr6:167381800-167391200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr6:167381800-167396200 Weak transcription HepG2 liver
9 chr6:167382000-167411200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:167382400-167392400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr6:167382400-167402200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr6:167382600-167392000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:167383200-167396200 Weak transcription Fetal Brain Female brain
14 chr6:167383200-167411200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr6:167383400-167387200 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr6:167383400-167389800 Weak transcription K562 blood
17 chr6:167383400-167411000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr6:167383600-167391000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:167383800-167392000 Weak transcription Brain Germinal Matrix brain
20 chr6:167384000-167396200 Weak transcription GM12878-XiMat blood
21 chr6:167384000-167410600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:167384000-167411000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr6:167384000-167411000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr6:167384400-167401400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:167384400-167407400 Weak transcription Fetal Intestine Large intestine
26 chr6:167384400-167411000 Weak transcription Fetal Muscle Leg muscle
27 chr6:167384600-167386800 Genic enhancers Dnd41 blood
28 chr6:167384600-167396200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr6:167384600-167398600 Weak transcription H1 Cell Line embryonic stem cell
30 chr6:167384600-167402800 Weak transcription Primary B cells from peripheral blood blood
31 chr6:167384600-167409600 Weak transcription Primary monocytes fromperipheralblood blood
32 chr6:167384800-167399200 Weak transcription Primary B cells from cord blood blood
33 chr6:167385000-167387800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr6:167385000-167402000 Weak transcription Fetal Intestine Small intestine
35 chr6:167385000-167402200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr6:167385000-167411000 Weak transcription Thymus Thymus
37 chr6:167385200-167389800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr6:167385200-167401400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr6:167385400-167386800 Weak transcription Primary T cells fromperipheralblood blood
40 chr6:167385400-167401000 Weak transcription Primary T cells from cord blood blood
41 chr6:167385400-167402200 Weak transcription HMEC breast
42 chr6:167385400-167403000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr6:167385400-167405800 Weak transcription Primary hematopoietic stem cells blood
44 chr6:167385400-167411000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:167385600-167387600 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr6:167385800-167386800 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr6:167386000-167387400 Strong transcription Fetal Thymus thymus
48 chr6:167386200-167387200 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr6:167386200-167387200 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr6:167386200-167387400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015