The 2.0 version of rSNPBase

Variant report

Variant rs41301629
Chromosome Location chr10:46135215-46135216
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:46090600-46167600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr10:46096200-46142000 Weak transcription Brain Anterior Caudate brain
3 chr10:46098200-46153400 Weak transcription HSMM muscle
4 chr10:46100200-46142600 Weak transcription Placenta Amnion Placenta Amnion
5 chr10:46103400-46142200 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr10:46104400-46151400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr10:46105600-46141600 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr10:46106400-46137000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr10:46106400-46141400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr10:46106400-46142000 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr10:46106800-46142000 Weak transcription Fetal Kidney kidney
12 chr10:46106800-46146400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr10:46107800-46141800 Weak transcription Colon Smooth Muscle Colon
14 chr10:46107800-46142000 Weak transcription Esophagus oesophagus
15 chr10:46108000-46155800 Weak transcription Brain Angular Gyrus brain
16 chr10:46108200-46142000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr10:46108400-46142000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr10:46108400-46149400 Weak transcription Rectal Smooth Muscle rectum
19 chr10:46108400-46167000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:46108600-46149200 Weak transcription Brain Hippocampus Middle brain
21 chr10:46108600-46155400 Weak transcription Fetal Intestine Small intestine
22 chr10:46108800-46142000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr10:46110200-46153800 Weak transcription NH-A brain
24 chr10:46110800-46156800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr10:46112200-46152400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr10:46118800-46142400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr10:46119800-46137000 Weak transcription Primary hematopoietic stem cells blood
28 chr10:46119800-46148200 Weak transcription Colonic Mucosa Colon
29 chr10:46120000-46157800 Weak transcription Muscle Satellite Cultured Cells --
30 chr10:46120200-46148400 Weak transcription Small Intestine intestine
31 chr10:46122200-46142000 Weak transcription H1 Cell Line embryonic stem cell
32 chr10:46122200-46154600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr10:46122200-46157200 Weak transcription Gastric stomach
34 chr10:46122400-46137200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr10:46122400-46141800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr10:46122400-46142000 Weak transcription Fetal Lung lung
37 chr10:46122400-46142200 Weak transcription Fetal Muscle Trunk muscle
38 chr10:46122400-46149000 Weak transcription Brain Substantia Nigra brain
39 chr10:46122400-46156400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr10:46122600-46136400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr10:46122600-46139400 Weak transcription Duodenum Mucosa Duodenum
42 chr10:46122600-46140600 Weak transcription Primary monocytes fromperipheralblood blood
43 chr10:46122600-46141400 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr10:46122600-46141800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr10:46122600-46142000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr10:46122600-46142000 Weak transcription Fetal Muscle Leg muscle
47 chr10:46122600-46142000 Weak transcription Stomach Smooth Muscle stomach
48 chr10:46122600-46142400 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr10:46122600-46142400 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr10:46122800-46137000 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015