Variant report

Variant rs17768692
Chromosome Location chr10:46156720-46156721
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:46090600-46167600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr10:46108400-46167000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr10:46110800-46156800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr10:46120000-46157800 Weak transcription Muscle Satellite Cultured Cells --
5 chr10:46122200-46157200 Weak transcription Gastric stomach
6 chr10:46133800-46157800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr10:46137200-46167000 Weak transcription Right Ventricle heart
8 chr10:46137600-46167200 Weak transcription Ovary ovary
9 chr10:46142400-46158000 Weak transcription A549 lung
10 chr10:46142800-46156800 Weak transcription Lung lung
11 chr10:46142800-46167000 Weak transcription Esophagus oesophagus
12 chr10:46142800-46167000 Weak transcription Psoas Muscle Psoas
13 chr10:46142800-46167000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr10:46142800-46167200 Weak transcription Aorta Aorta
15 chr10:46143200-46167000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr10:46143200-46167200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr10:46143200-46167400 Weak transcription Left Ventricle heart
18 chr10:46143400-46167000 Weak transcription H1 Cell Line embryonic stem cell
19 chr10:46143400-46167000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr10:46143600-46167200 Weak transcription Fetal Lung lung
21 chr10:46143800-46157400 Weak transcription Stomach Smooth Muscle stomach
22 chr10:46147200-46167000 Weak transcription Duodenum Mucosa Duodenum
23 chr10:46148200-46158000 Weak transcription Fetal Heart heart
24 chr10:46149600-46160800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr10:46149600-46167000 Weak transcription Brain Hippocampus Middle brain
26 chr10:46149600-46167200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr10:46149800-46163800 Weak transcription Brain Anterior Caudate brain
28 chr10:46152000-46157600 ZNF genes & repeats GM12878-XiMat blood
29 chr10:46152400-46157000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr10:46152800-46167000 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr10:46154000-46167000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr10:46154800-46158600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr10:46155000-46157800 ZNF genes & repeats Primary hematopoietic stem cells blood
34 chr10:46155400-46157000 ZNF genes & repeats Fetal Intestine Small intestine
35 chr10:46155400-46157200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
36 chr10:46155600-46157000 Strong transcription Fetal Muscle Leg muscle
37 chr10:46155600-46157200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
38 chr10:46155600-46157200 Strong transcription Liver Liver
39 chr10:46155600-46157400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
40 chr10:46155800-46156800 ZNF genes & repeats Primary B cells from peripheral blood blood
41 chr10:46155800-46156800 ZNF genes & repeats Primary T cells from cord blood blood
42 chr10:46155800-46156800 ZNF genes & repeats Primary T killer memory cells from peripheral blood blood
43 chr10:46155800-46156800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
44 chr10:46156000-46156800 Enhancers HUES64 Cell Line embryonic stem cell
45 chr10:46156000-46156800 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
46 chr10:46156000-46157000 ZNF genes & repeats Primary B cells from cord blood blood
47 chr10:46156000-46157000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
48 chr10:46156000-46157000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr10:46156200-46156800 Enhancers HUVEC blood vessel
50 chr10:46156200-46157000 Enhancers iPS-15b Cell Line embryonic stem cell

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