Variant report

Variant	rs17157825
Chromosome Location	chr10:45958676-45958677
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:45958529-45959118	HL-60	blood:	n/a	n/a
2	POLR2A	chr10:45955366-45958859	GM12891	blood:	n/a	n/a
3	POLR2A	chr10:45958343-45959008	GM12892	blood:	n/a	n/a
4	POLR2A	chr10:45958317-45959987	GM12878	blood:	n/a	n/a
5	POLR2A	chr10:45958356-45958998	GM12878	blood:	n/a	n/a
6	RUNX3	chr10:45958288-45958731	GM12878	blood:	n/a	n/a

Variant related genes	Relation type
MARCH8	TF binding region

Extended variants
information (count: 228 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:223)

rs_ID	r²[population]
rs10508895	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10508896	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1060848	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11239526	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12098366	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12761399	0.88[AMR][1000 genomes]
rs12761573	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12762495	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12763205	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12763285	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12764485	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12764652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12764693	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12765244	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12766550	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12766764	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12768131	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12769244	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12771275	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12772102	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12772485	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12773263	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12773463	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12774453	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12774690	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12775527	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12776291	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12777172	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12778143	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12778980	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12779005	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12779198	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12779204	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12779281	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12779637	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12779976	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12781186	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12781506	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12783233	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17157798	0.97[ASN][1000 genomes]
rs17157832	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17157836	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17157839	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17157852	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17157859	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17157861	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17157880	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17157884	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17157885	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17157887	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17157890	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17157898	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17157919	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17157928	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17157931	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17157941	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17157944	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17157945	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17451208	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs17523413	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17696005	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes]
rs17768692	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes]
rs2229136	0.97[ASN][1000 genomes]
rs2279433	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2279434	0.97[ASN][1000 genomes]
rs2288619	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs33997730	0.88[AMR][1000 genomes]
rs34011467	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34019727	0.88[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs34081402	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34081552	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34138033	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34144887	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34163035	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34176769	0.88[AMR][1000 genomes]
rs34195613	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34268168	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34285816	0.97[ASN][1000 genomes]
rs34309840	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34312822	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34383275	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34415465	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34516867	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34539215	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34566829	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34574958	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34604216	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34618850	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34654893	0.97[ASN][1000 genomes]
rs34661476	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34663276	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34670342	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34731408	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34771643	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34793991	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34879733	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34897497	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34937315	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34960345	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35001302	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35003524	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35034867	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35036712	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35047800	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35049879	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35070150	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35079443	0.97[ASN][1000 genomes]
rs35081812	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35131026	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35150810	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35172875	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35183191	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35183751	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35187216	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35294227	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35303148	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35326978	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35331393	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35349326	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35356752	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35394192	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35410535	0.97[ASN][1000 genomes]
rs35424022	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35464392	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35469686	0.88[AMR][1000 genomes]
rs35488254	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35504302	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35506889	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35585999	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35626777	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35629170	0.85[ASN][1000 genomes]
rs35632234	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35639934	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35670420	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35713143	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35735968	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs35750365	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35775604	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs35824277	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35902429	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs35916836	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35918870	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs35934513	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35968565	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35993099	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs36047811	0.97[ASN][1000 genomes]
rs36052429	0.88[AMR][1000 genomes]
rs36053776	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs36054203	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs36070535	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs36070902	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs36074276	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs36100685	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs36102549	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs36109121	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3740109	0.97[ASN][1000 genomes]
rs3740111	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3764990	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3824616	0.97[ASN][1000 genomes]
rs3824618	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4418752	1.00[CEU][hapmap]
rs4442500	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs60791882	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs71494785	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494786	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs71494787	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494788	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494789	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494790	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494791	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494792	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494793	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494794	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494797	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494798	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494799	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71494800	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71496603	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71496605	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71496606	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71496607	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71496608	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs71496609	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs71496610	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs71496611	0.88[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs71496612	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496613	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496614	0.85[ASN][1000 genomes]
rs71496618	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496619	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496620	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496621	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496622	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496623	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496624	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71496625	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71499565	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71499566	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs71499567	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs71515355	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73291113	0.89[EUR][1000 genomes]
rs73291115	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73291121	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73291122	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73291195	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73291198	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs768673	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs901682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs901683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs901684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9422439	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422440	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422441	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422442	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422647	0.88[AMR][1000 genomes]
rs9422650	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422651	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422652	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422653	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422654	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422655	1.00[CHB][hapmap];0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422657	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9422658	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430166	chr10:45668894-46148794	Bivalent Enhancer Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv993428	chr10:45742877-46224333	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv895108	chr10:45878908-46224333	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	nsv895109	chr10:45882741-46210665	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
5	nsv1043536	chr10:45915941-46076235	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17157825	ZFAND4	cis	Heart Left Ventricle	GTEx

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45938600-45967200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:45938600-45967200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr10:45943200-45965400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr10:45948000-45963600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr10:45948600-45959800	Strong transcription	Fetal Intestine Small	intestine
6	chr10:45948600-45959800	Strong transcription	Fetal Stomach	stomach
7	chr10:45949200-45965600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr10:45949400-45959800	Strong transcription	Primary T cells from cord blood	blood
9	chr10:45950000-45967200	Weak transcription	Psoas Muscle	Psoas
10	chr10:45950200-45959400	Strong transcription	Fetal Intestine Large	intestine
11	chr10:45950200-45960600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr10:45950400-45959400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr10:45950400-45959600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr10:45950400-45966200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr10:45950800-45965600	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr10:45951000-45958800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr10:45951000-45960600	Weak transcription	Fetal Brain Male	brain
18	chr10:45951000-45965600	Weak transcription	Brain Germinal Matrix	brain
19	chr10:45951200-45959000	Strong transcription	Rectal Mucosa Donor 31	rectum
20	chr10:45951200-45959400	Strong transcription	Primary T helper cells fromperipheralblood	blood
21	chr10:45951200-45959600	Strong transcription	Primary T cells fromperipheralblood	blood
22	chr10:45951200-45959600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
23	chr10:45951200-45960600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
24	chr10:45951400-45962200	Weak transcription	HMEC	breast
25	chr10:45951600-45959400	Strong transcription	Ovary	ovary
26	chr10:45951600-45959800	Strong transcription	Brain Inferior Temporal Lobe	brain
27	chr10:45951600-45965600	Weak transcription	Small Intestine	intestine
28	chr10:45952000-45959400	Strong transcription	Fetal Muscle Trunk	muscle
29	chr10:45953000-45959000	Strong transcription	Rectal Smooth Muscle	rectum
30	chr10:45953000-45965600	Weak transcription	Colon Smooth Muscle	Colon
31	chr10:45953600-45969200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr10:45954600-45959200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr10:45954600-45965600	Weak transcription	Cortex derived primary cultured neurospheres	brain
34	chr10:45954800-45960200	Weak transcription	Brain Hippocampus Middle	brain
35	chr10:45955000-45965600	Weak transcription	NHLF	lung
36	chr10:45955200-45960200	Weak transcription	Gastric	stomach
37	chr10:45955600-45959000	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
38	chr10:45955600-45960600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr10:45955600-45962400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr10:45955600-45965400	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr10:45955800-45959000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr10:45955800-45959600	Weak transcription	Right Ventricle	heart
43	chr10:45956000-45960600	Weak transcription	Skeletal Muscle Male	skeletal muscle
44	chr10:45956200-45960600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
45	chr10:45956200-45965400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr10:45956400-45966800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr10:45956600-45960600	Weak transcription	Brain Angular Gyrus	brain
48	chr10:45956600-45965600	Weak transcription	Skeletal Muscle Female	skeletal muscle
49	chr10:45956800-45960200	Weak transcription	K562	blood
50	chr10:45956800-45960600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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