The 2.0 version of rSNPBase

Variant report

Variant rs35506889
Chromosome Location chr10:46084637-46084638
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:46072600-46086600 Weak transcription Small Intestine intestine
2 chr10:46076400-46085600 Weak transcription HSMMtube muscle
3 chr10:46076800-46087000 Weak transcription Brain Hippocampus Middle brain
4 chr10:46076800-46087800 Weak transcription Primary monocytes fromperipheralblood blood
5 chr10:46076800-46087800 Weak transcription Brain Angular Gyrus brain
6 chr10:46076800-46088000 Weak transcription Colonic Mucosa Colon
7 chr10:46076800-46088000 Weak transcription Stomach Smooth Muscle stomach
8 chr10:46076800-46089000 Weak transcription Right Ventricle heart
9 chr10:46077000-46085400 Weak transcription Primary T cells fromperipheralblood blood
10 chr10:46077000-46085600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr10:46077400-46087800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr10:46077400-46087800 Weak transcription Colon Smooth Muscle Colon
13 chr10:46077600-46087400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr10:46077600-46088400 Weak transcription Osteobl bone
15 chr10:46077800-46085400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr10:46077800-46085400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr10:46077800-46085400 Weak transcription Duodenum Mucosa Duodenum
18 chr10:46077800-46086200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr10:46077800-46086200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr10:46077800-46087000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr10:46077800-46087400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr10:46077800-46087800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr10:46077800-46088400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr10:46077800-46088400 Weak transcription NHLF lung
25 chr10:46078000-46087200 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr10:46078200-46085200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr10:46078200-46087000 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr10:46078200-46088000 Weak transcription Fetal Intestine Large intestine
29 chr10:46080000-46086000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr10:46080200-46088000 Weak transcription Hela-S3 cervix
31 chr10:46080400-46088800 Weak transcription A549 lung
32 chr10:46081600-46089000 Weak transcription Placenta Amnion Placenta Amnion
33 chr10:46082000-46086000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr10:46082000-46087000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr10:46082400-46088200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr10:46082600-46085200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr10:46082600-46086800 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr10:46082800-46085000 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr10:46082800-46088400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr10:46083200-46085400 Weak transcription Brain Germinal Matrix brain
41 chr10:46083400-46086400 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr10:46083400-46088800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr10:46083400-46088800 Weak transcription Aorta Aorta
44 chr10:46083600-46085200 Weak transcription Fetal Lung lung
45 chr10:46084000-46088400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr10:46084000-46088800 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr10:46084000-46088800 Weak transcription Fetal Intestine Small intestine
48 chr10:46084200-46085200 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr10:46084400-46085000 Enhancers Liver Liver
50 chr10:46084400-46088400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015