Variant report
| Variant | rs41432345 |
|---|---|
| Chromosome Location | chr3:46250374-46250375 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:46245600-46251800 | Weak transcription | Spleen | Spleen |
| 2 | chr3:46247000-46251800 | Enhancers | Primary B cells from peripheral blood | blood |
| 3 | chr3:46247200-46250600 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 4 | chr3:46248200-46250400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 5 | chr3:46248200-46256400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr3:46248400-46256400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 7 | chr3:46248600-46251000 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 8 | chr3:46249400-46250400 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 9 | chr3:46249400-46250400 | Enhancers | Colonic Mucosa | Colon |
| 10 | chr3:46249400-46250400 | Enhancers | Dnd41 | blood |
| 11 | chr3:46249400-46250600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 12 | chr3:46249400-46250800 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 13 | chr3:46249400-46251200 | Enhancers | Primary T cells from cord blood | blood |
| 14 | chr3:46249600-46250400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 15 | chr3:46249600-46250400 | Weak transcription | Brain Substantia Nigra | brain |
| 16 | chr3:46249600-46250400 | Enhancers | Thymus | Thymus |
| 17 | chr3:46249600-46250600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 18 | chr3:46249600-46251000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr3:46249600-46251200 | Enhancers | NHLF | lung |
| 20 | chr3:46249600-46251400 | Enhancers | HMEC | breast |
| 21 | chr3:46249600-46251800 | Enhancers | Osteobl | bone |
| 22 | chr3:46249800-46250400 | Weak transcription | Placenta | Placenta |
| 23 | chr3:46249800-46250600 | Enhancers | Adipose Nuclei | Adipose |
| 24 | chr3:46249800-46251000 | Weak transcription | NHDF-Ad | bronchial |
| 25 | chr3:46249800-46251200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 26 | chr3:46249800-46252200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 27 | chr3:46249800-46255800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 28 | chr3:46250000-46250600 | Enhancers | Primary T cells fromperipheralblood | blood |
| 29 | chr3:46250000-46250600 | Enhancers | Primary hematopoietic stem cells | blood |
| 30 | chr3:46250000-46250600 | Enhancers | Lung | lung |
| 31 | chr3:46250000-46251000 | Bivalent Enhancer | Skeletal Muscle Female | skeletal muscle |
| 32 | chr3:46250000-46252000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 33 | chr3:46250000-46252200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 34 | chr3:46250000-46252200 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 35 | chr3:46250000-46252400 | Enhancers | GM12878-XiMat | blood |
| 36 | chr3:46250000-46254600 | Enhancers | Fetal Thymus | thymus |
| 37 | chr3:46250200-46250600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 38 | chr3:46250200-46251200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 39 | chr3:46250200-46251800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 40 | chr3:46250200-46252000 | Enhancers | Primary B cells from cord blood | blood |
| 41 | chr3:46250200-46252000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 42 | chr3:46250200-46252000 | Enhancers | Brain Hippocampus Middle | brain |
| 43 | chr3:46250200-46252600 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 44 | chr3:46250200-46254000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 45 | chr3:46250200-46254000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 46 | chr3:46250200-46254000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 47 | chr3:46250200-46254200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 48 | chr3:46250200-46254200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 49 | chr3:46250200-46254200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 50 | chr3:46250200-46254200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
