Variant report

Variant	rs4256562
Chromosome Location	chr8:102747172-102747173
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:102746868..102749191-chr8:102749399..102751550,2	K562	blood:
2	chr8:102741883..102743984-chr8:102747080..102748581,2	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11787002	0.88[EUR][1000 genomes]
rs12681368	0.81[EUR][1000 genomes]
rs13270960	0.88[EUR][1000 genomes]
rs16868264	0.84[JPT][hapmap]
rs6468791	0.94[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7828300	0.84[EUR][1000 genomes]
rs7829690	0.94[CHB][hapmap];0.85[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7843836	0.93[YRI][hapmap]
rs9297308	0.91[EUR][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102713800-102768400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:102730000-102756000	Weak transcription	Psoas Muscle	Psoas
3	chr8:102731600-102752600	Weak transcription	Aorta	Aorta
4	chr8:102732000-102762400	Weak transcription	Lung	lung
5	chr8:102735000-102760600	Weak transcription	Liver	Liver
6	chr8:102735400-102752800	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr8:102735400-102757800	Weak transcription	Fetal Stomach	stomach
8	chr8:102735400-102768400	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr8:102735400-102768400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr8:102735800-102759200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr8:102738800-102753000	Weak transcription	GM12878-XiMat	blood
12	chr8:102738800-102756800	Weak transcription	Fetal Brain Female	brain
13	chr8:102739200-102747200	Weak transcription	Fetal Kidney	kidney
14	chr8:102739200-102749800	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr8:102742000-102749400	Weak transcription	Ovary	ovary
16	chr8:102742200-102759200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr8:102743600-102750800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr8:102743800-102747600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:102743800-102761800	Weak transcription	Primary T cells fromperipheralblood	blood
20	chr8:102744000-102768000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr8:102744400-102752200	Strong transcription	Fetal Muscle Leg	muscle
22	chr8:102745000-102750800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr8:102746200-102748400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr8:102746400-102758000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr8:102746600-102763800	Weak transcription	Left Ventricle	heart
26	chr8:102746600-102771000	Weak transcription	Fetal Heart	heart
27	chr8:102747000-102748800	Weak transcription	Fetal Muscle Trunk	muscle

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