Variant report

Variant	rs4262223
Chromosome Location	chr6:82710285-82710286
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10755418	0.82[EUR][1000 genomes]
rs10806231	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10806232	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10806233	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10806234	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10943838	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10943841	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10943842	0.82[EUR][1000 genomes]
rs10943845	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12199470	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12212514	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12213171	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12215152	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12525526	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1342193	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1361686	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1361688	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1418299	0.82[EUR][1000 genomes]
rs1418300	0.82[EUR][1000 genomes]
rs1418301	0.83[EUR][1000 genomes]
rs1857114	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1857115	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1935416	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2185729	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2323536	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2875088	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4292569	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4637689	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4706148	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4706149	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4706150	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4706914	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4706915	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4706917	0.82[EUR][1000 genomes]
rs6903637	0.83[EUR][1000 genomes]
rs6937709	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6939071	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7754923	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7770981	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82705400-82710800	Enhancers	HMEC	breast
2	chr6:82706200-82715000	Weak transcription	Placenta	Placenta
3	chr6:82707000-82710600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr6:82707400-82710800	Enhancers	NHEK	skin
5	chr6:82707600-82715200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr6:82707800-82714000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:82708200-82710400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr6:82708200-82722400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr6:82708800-82710400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr6:82709200-82713200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr6:82709200-82715200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:82709400-82710400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr6:82709400-82723000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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