Variant report

Variant	rs2185729
Chromosome Location	chr6:82716918-82716919
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10755418	0.83[EUR][1000 genomes]
rs10806231	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10806232	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10806233	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10806234	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10943838	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10943841	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10943842	0.83[EUR][1000 genomes]
rs10943845	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12199470	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12212514	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12213171	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12215152	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12525526	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1342193	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1361686	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1361688	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1418296	0.80[EUR][1000 genomes]
rs1418299	0.81[EUR][1000 genomes]
rs1418300	0.81[EUR][1000 genomes]
rs1418301	0.82[EUR][1000 genomes]
rs1857114	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1857115	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1935416	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2323536	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2875088	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4262223	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4292569	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4449673	0.80[EUR][1000 genomes]
rs4637689	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4706148	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4706149	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4706150	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4706914	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4706915	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4706917	0.83[EUR][1000 genomes]
rs6903637	0.82[EUR][1000 genomes]
rs6913193	0.80[EUR][1000 genomes]
rs6937709	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6939071	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7754923	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7770981	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82708200-82722400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr6:82709400-82723000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:82716000-82724400	Weak transcription	Right Atrium	heart
4	chr6:82716800-82717400	Active TSS	Fetal Heart	heart

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