The 2.0 version of rSNPBase

Variant report

Variant rs4342598
Chromosome Location chr8:9521121-9521122
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:9495800-9531000 Weak transcription Gastric stomach
2 chr8:9501600-9525400 Weak transcription Thymus Thymus
3 chr8:9501800-9528400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr8:9501800-9534400 Weak transcription Fetal Heart heart
5 chr8:9503000-9521200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr8:9504200-9529400 Weak transcription Colon Smooth Muscle Colon
7 chr8:9504800-9549600 Weak transcription Pancreas Pancrea
8 chr8:9506000-9521200 Weak transcription Aorta Aorta
9 chr8:9506400-9530200 Weak transcription HepG2 liver
10 chr8:9507800-9529400 Weak transcription Primary T cells fromperipheralblood blood
11 chr8:9508400-9521200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr8:9509200-9522400 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr8:9509400-9523000 Weak transcription Brain Anterior Caudate brain
14 chr8:9509400-9545000 Weak transcription HSMM muscle
15 chr8:9509600-9529400 Weak transcription Spleen Spleen
16 chr8:9509600-9532000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr8:9510000-9528800 Weak transcription Stomach Smooth Muscle stomach
18 chr8:9510400-9563800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr8:9510600-9526400 Weak transcription NH-A brain
20 chr8:9510800-9523000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr8:9511000-9564200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr8:9511400-9537000 Weak transcription Left Ventricle heart
23 chr8:9511600-9521800 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr8:9511600-9522800 Weak transcription Osteobl bone
25 chr8:9511600-9554600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr8:9512400-9551400 Weak transcription Dnd41 blood
27 chr8:9512600-9537200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr8:9512600-9543800 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr8:9512800-9530200 Weak transcription Duodenum Mucosa Duodenum
30 chr8:9513000-9521200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr8:9513000-9521400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr8:9513000-9524800 Weak transcription Lung lung
33 chr8:9513200-9534000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr8:9513200-9564200 Weak transcription Ovary ovary
35 chr8:9513200-9567400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr8:9513400-9522600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr8:9513400-9523800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr8:9513400-9605400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr8:9513600-9543600 Weak transcription Fetal Stomach stomach
40 chr8:9513800-9563600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr8:9516200-9532000 Weak transcription Fetal Intestine Large intestine
42 chr8:9519000-9523200 Weak transcription Primary hematopoietic stem cells blood
43 chr8:9520200-9521800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr8:9520200-9529400 Weak transcription Liver Liver
45 chr8:9520400-9521600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr8:9520600-9521400 ZNF genes & repeats Primary T cells from cord blood blood
47 chr8:9520600-9523400 Weak transcription Stomach Mucosa stomach
48 chr8:9520800-9522800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr8:9520800-9528200 Weak transcription Brain Substantia Nigra brain
50 chr8:9521000-9521200 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015