The 2.0 version of rSNPBase

Variant report

Variant rs55870346
Chromosome Location chr8:9541598-9541599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:9504800-9549600 Weak transcription Pancreas Pancrea
2 chr8:9509400-9545000 Weak transcription HSMM muscle
3 chr8:9510400-9563800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr8:9511000-9564200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr8:9511600-9554600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr8:9512400-9551400 Weak transcription Dnd41 blood
7 chr8:9512600-9543800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr8:9513200-9564200 Weak transcription Ovary ovary
9 chr8:9513200-9567400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr8:9513400-9605400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr8:9513600-9543600 Weak transcription Fetal Stomach stomach
12 chr8:9513800-9563600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr8:9521000-9544800 Weak transcription Primary B cells from peripheral blood blood
14 chr8:9521400-9544200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr8:9522000-9545000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr8:9522400-9546000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr8:9523800-9545000 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr8:9524200-9544600 Weak transcription Primary hematopoietic stem cells blood
19 chr8:9529600-9545000 Weak transcription Primary T cells fromperipheralblood blood
20 chr8:9529600-9545000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr8:9529600-9549000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr8:9529600-9606400 Weak transcription Esophagus oesophagus
23 chr8:9530600-9543800 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr8:9530600-9549400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr8:9530800-9543400 Weak transcription Primary T cells from cord blood blood
26 chr8:9530800-9549800 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr8:9531200-9564000 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr8:9532000-9543400 Weak transcription A549 lung
29 chr8:9532000-9543400 Weak transcription GM12878-XiMat blood
30 chr8:9532400-9543400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr8:9534800-9544600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr8:9534800-9563600 Weak transcription HepG2 liver
33 chr8:9535000-9543600 Weak transcription Fetal Intestine Small intestine
34 chr8:9535000-9544800 Weak transcription Muscle Satellite Cultured Cells --
35 chr8:9535000-9545400 Weak transcription Liver Liver
36 chr8:9535000-9564800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr8:9535000-9608000 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr8:9535400-9560800 Weak transcription HMEC breast
39 chr8:9535400-9563800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr8:9535600-9543600 Weak transcription Fetal Intestine Large intestine
41 chr8:9536400-9563400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr8:9537000-9543400 Weak transcription Adipose Nuclei Adipose
43 chr8:9537200-9545000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr8:9537400-9543400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr8:9537400-9543600 Weak transcription Left Ventricle heart
46 chr8:9537400-9543600 Weak transcription Lung lung
47 chr8:9537400-9544600 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr8:9537400-9549400 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr8:9537400-9563600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr8:9537600-9543400 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015