The 2.0 version of rSNPBase

Variant report

Variant rs59400423
Chromosome Location chr8:9549430-9549431
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:9504800-9549600 Weak transcription Pancreas Pancrea
2 chr8:9510400-9563800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr8:9511000-9564200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr8:9511600-9554600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr8:9512400-9551400 Weak transcription Dnd41 blood
6 chr8:9513200-9564200 Weak transcription Ovary ovary
7 chr8:9513200-9567400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr8:9513400-9605400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr8:9513800-9563600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr8:9529600-9606400 Weak transcription Esophagus oesophagus
11 chr8:9530800-9549800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr8:9531200-9564000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr8:9534800-9563600 Weak transcription HepG2 liver
14 chr8:9535000-9564800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr8:9535000-9608000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr8:9535400-9560800 Weak transcription HMEC breast
17 chr8:9535400-9563800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr8:9536400-9563400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr8:9537400-9563600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr8:9537600-9592400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr8:9539800-9549800 Weak transcription Brain Germinal Matrix brain
22 chr8:9540000-9565400 Weak transcription Fetal Kidney kidney
23 chr8:9541400-9592200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr8:9541600-9563600 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr8:9542200-9606800 Weak transcription Small Intestine intestine
26 chr8:9542400-9553400 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr8:9543000-9592200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr8:9543400-9606400 Weak transcription H9 Cell Line embryonic stem cell
29 chr8:9543600-9550000 Strong transcription Fetal Intestine Large intestine
30 chr8:9543800-9550400 Weak transcription Adipose Nuclei Adipose
31 chr8:9543800-9563800 Weak transcription Fetal Stomach stomach
32 chr8:9543800-9564200 Weak transcription Fetal Muscle Trunk muscle
33 chr8:9543800-9564200 Weak transcription NH-A brain
34 chr8:9544000-9549600 Weak transcription GM12878-XiMat blood
35 chr8:9544000-9562800 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr8:9544000-9562800 Weak transcription Left Ventricle heart
37 chr8:9544000-9586200 Weak transcription Thymus Thymus
38 chr8:9544000-9592400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr8:9544000-9592400 Weak transcription Psoas Muscle Psoas
40 chr8:9544200-9571200 Weak transcription Aorta Aorta
41 chr8:9545000-9550600 Weak transcription NHEK skin
42 chr8:9545400-9549600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr8:9545400-9560600 Weak transcription Primary hematopoietic stem cells blood
44 chr8:9545400-9564400 Weak transcription HSMM muscle
45 chr8:9545600-9549600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr8:9545600-9560600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr8:9545600-9562000 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr8:9545600-9563600 Weak transcription Fetal Muscle Leg muscle
49 chr8:9545600-9564200 Weak transcription Osteobl bone
50 chr8:9545600-9564400 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015