The 2.0 version of rSNPBase

Variant report

Variant rs73535829
Chromosome Location chr8:9449998-9449999
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:9414400-9459600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr8:9417200-9450000 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr8:9427400-9450000 Weak transcription Thymus Thymus
4 chr8:9428200-9466200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr8:9428400-9450000 Weak transcription Psoas Muscle Psoas
6 chr8:9429000-9450000 Weak transcription Fetal Kidney kidney
7 chr8:9431000-9450000 Weak transcription Colon Smooth Muscle Colon
8 chr8:9433600-9461000 Weak transcription Fetal Stomach stomach
9 chr8:9434800-9459000 Weak transcription Primary B cells from cord blood blood
10 chr8:9435400-9465600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr8:9435400-9468400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr8:9435600-9450000 Weak transcription Small Intestine intestine
13 chr8:9435600-9457600 Weak transcription Fetal Muscle Leg muscle
14 chr8:9435600-9472400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr8:9435800-9459400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr8:9435800-9465400 Weak transcription Lung lung
17 chr8:9435800-9465600 Weak transcription Pancreas Pancrea
18 chr8:9435800-9472600 Weak transcription HSMMtube muscle
19 chr8:9437400-9468000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr8:9438000-9450000 Weak transcription K562 blood
21 chr8:9439200-9450000 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr8:9439200-9450000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr8:9439400-9472400 Weak transcription HSMM muscle
24 chr8:9439600-9450000 Weak transcription Adipose Nuclei Adipose
25 chr8:9439600-9450600 Weak transcription Primary monocytes fromperipheralblood blood
26 chr8:9439600-9465600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr8:9440400-9454800 Weak transcription GM12878-XiMat blood
28 chr8:9440600-9465600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr8:9440800-9450000 Weak transcription Primary B cells from peripheral blood blood
30 chr8:9441200-9460600 Weak transcription Fetal Intestine Large intestine
31 chr8:9442600-9450000 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr8:9442600-9465400 Weak transcription Primary T cells fromperipheralblood blood
33 chr8:9445400-9450000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr8:9445400-9459800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr8:9446400-9451000 Enhancers Brain Inferior Temporal Lobe brain
36 chr8:9446800-9450800 Enhancers Brain Hippocampus Middle brain
37 chr8:9447000-9451000 Enhancers Brain Anterior Caudate brain
38 chr8:9447000-9451000 Enhancers Brain Substantia Nigra brain
39 chr8:9447600-9465400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr8:9447800-9450000 Weak transcription Left Ventricle heart
41 chr8:9447800-9450600 Weak transcription Gastric stomach
42 chr8:9447800-9457600 Weak transcription Right Atrium heart
43 chr8:9448000-9450800 Enhancers Dnd41 blood
44 chr8:9448000-9459600 Weak transcription Fetal Intestine Small intestine
45 chr8:9448200-9450200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr8:9448200-9450400 Enhancers Cortex derived primary cultured neurospheres brain
47 chr8:9448400-9450000 Enhancers Pancreatic Islets Pancreatic Islet
48 chr8:9448400-9450200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr8:9448400-9450800 Enhancers Primary T helper cells PMA-I stimulated --
50 chr8:9448400-9451000 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015