Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs13252745	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13257807	0.95[ASN][1000 genomes]
rs13261104	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs13262740	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1517124	0.96[ASN][1000 genomes]
rs1607144	0.96[ASN][1000 genomes]
rs1971527	0.81[ASN][1000 genomes]
rs2591011	1.00[ASN][1000 genomes]
rs2591012	1.00[ASN][1000 genomes]
rs2591015	0.97[ASN][1000 genomes]
rs2591016	0.99[ASN][1000 genomes]
rs2591017	0.80[ASN][1000 genomes]
rs6991818	0.81[ASN][1000 genomes]
rs7000384	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7001418	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7013597	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7015549	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7818147	0.87[ASN][1000 genomes]
rs7822588	0.87[ASN][1000 genomes]
rs7823116	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7823422	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7838935	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs814441	0.92[ASN][1000 genomes]
rs814463	0.95[ASN][1000 genomes]
rs9298133	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948687	chr8:69041121-69642540	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1031040	chr8:69265471-69315554	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv508512	chr8:69268794-69324532	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1023810	chr8:69308665-69440129	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv539644	chr8:69308665-69440129	Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69308200-69312200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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