Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10132985	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10134176	0.85[JPT][hapmap]
rs10162413	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10483763	0.95[CEU][hapmap];0.85[JPT][hapmap]
rs1111450	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1111452	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11158471	0.87[MEX][hapmap]
rs11158472	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1950983	1.00[CEU][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap]
rs1950986	0.85[JPT][hapmap]
rs1956670	0.95[CEU][hapmap];0.92[GIH][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap]
rs2146940	0.95[CEU][hapmap];1.00[GIH][hapmap];0.89[JPT][hapmap];1.00[MEX][hapmap]
rs3861503	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3915801	1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap]
rs4584750	1.00[CEU][hapmap]
rs4902201	1.00[CEU][hapmap]
rs6573480	0.80[JPT][hapmap]
rs7159344	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs8006668	0.80[JPT][hapmap]
rs8015817	0.95[CEU][hapmap]
rs8017368	1.00[CEU][hapmap]
rs8018618	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8019140	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.81[TSI][hapmap]
rs941709	1.00[CEU][hapmap];0.92[GIH][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527251	chr14:63400786-64068806	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv520528	chr14:63400786-64157117	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv564893	chr14:63526931-63796122	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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