Variant report

Variant rs4499594
Chromosome Location chr3:143568176-143568177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:143565800-143569200 Active TSS Skeletal Muscle Male skeletal muscle
2 chr3:143566000-143568200 Active TSS Brain Anterior Caudate brain
3 chr3:143566000-143568400 Active TSS Ovary ovary
4 chr3:143566200-143568600 Active TSS Brain Inferior Temporal Lobe brain
5 chr3:143567400-143568200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr3:143567400-143568200 Enhancers Rectal Mucosa Donor 31 rectum
7 chr3:143567400-143568400 Enhancers Fetal Thymus thymus
8 chr3:143567400-143568800 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr3:143567400-143569000 Enhancers HSMM muscle
10 chr3:143567400-143569000 Enhancers NHEK skin
11 chr3:143567400-143570000 Enhancers Primary monocytes fromperipheralblood blood
12 chr3:143567400-143570600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:143567400-143571000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr3:143567600-143568200 Enhancers Primary B cells from cord blood blood
15 chr3:143567600-143568400 Flanking Active TSS Brain Hippocampus Middle brain
16 chr3:143567600-143568400 Flanking Active TSS Brain Substantia Nigra brain
17 chr3:143567600-143569000 Enhancers HMEC breast
18 chr3:143567600-143569200 Enhancers Fetal Stomach stomach
19 chr3:143567600-143569200 Enhancers HUVEC blood vessel
20 chr3:143567600-143569400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr3:143567600-143569600 Enhancers Primary T cells from cord blood blood
22 chr3:143567600-143569600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr3:143567600-143569600 Enhancers HSMMtube muscle
24 chr3:143567800-143568200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr3:143567800-143568200 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr3:143567800-143568200 Enhancers Dnd41 blood
27 chr3:143567800-143568400 Enhancers Adipose Nuclei Adipose
28 chr3:143567800-143568600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr3:143567800-143568600 Enhancers Muscle Satellite Cultured Cells --
30 chr3:143567800-143568600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr3:143567800-143568600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr3:143567800-143568600 Weak transcription Fetal Lung lung
33 chr3:143567800-143568600 Weak transcription Osteobl bone
34 chr3:143567800-143568800 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr3:143567800-143568800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr3:143567800-143568800 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr3:143567800-143568800 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr3:143567800-143569000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr3:143567800-143569000 Enhancers Monocytes-CD14+_RO01746 blood
40 chr3:143567800-143569000 Enhancers NHLF lung
41 chr3:143567800-143569200 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr3:143567800-143569200 Enhancers Skeletal Muscle Female skeletal muscle
43 chr3:143567800-143569200 Enhancers NH-A brain
44 chr3:143567800-143569400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr3:143567800-143569600 Enhancers Primary T cells fromperipheralblood blood
46 chr3:143567800-143569600 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr3:143567800-143569600 Enhancers Primary T helper cells fromperipheralblood blood
48 chr3:143567800-143569600 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr3:143567800-143569600 Enhancers Duodenum Smooth Muscle Duodenum
50 chr3:143567800-143569800 Weak transcription iPS-15b Cell Line embryonic stem cell

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