Variant report

Variant	rs4518225
Chromosome Location	chr4:149754206-149754207
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10003214	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10019546	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10021639	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10031956	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10489051	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10489054	1.00[ASN][1000 genomes]
rs13112975	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13133607	1.00[ASN][1000 genomes]
rs13151384	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17025376	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17025396	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17487051	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17584168	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17725791	1.00[ASN][1000 genomes]
rs17778070	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2157932	1.00[ASN][1000 genomes]
rs28394720	1.00[ASN][1000 genomes]
rs28407733	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28417942	1.00[ASN][1000 genomes]
rs28478129	1.00[ASN][1000 genomes]
rs28491207	1.00[ASN][1000 genomes]
rs28498848	1.00[ASN][1000 genomes]
rs28544066	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28557410	1.00[ASN][1000 genomes]
rs28636985	1.00[ASN][1000 genomes]
rs28787362	1.00[ASN][1000 genomes]
rs28860488	1.00[ASN][1000 genomes]
rs35983161	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66979066	1.00[ASN][1000 genomes]
rs67997931	1.00[ASN][1000 genomes]
rs6835584	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6836835	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6846370	0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6854049	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6854659	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719869	1.00[ASN][1000 genomes]
rs756862	1.00[ASN][1000 genomes]
rs7665428	0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7676142	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7676393	0.98[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7688521	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9654219	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9654230	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9992331	1.00[ASN][1000 genomes]
rs9993762	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9994141	1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149744800-149755400	Weak transcription	Psoas Muscle	Psoas
2	chr4:149751800-149755800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr4:149752400-149756000	Enhancers	HUVEC	blood vessel
4	chr4:149752800-149754600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr4:149753200-149754400	Enhancers	NHDF-Ad	bronchial
6	chr4:149753800-149756000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr4:149753800-149756000	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr4:149753800-149756200	Weak transcription	NHEK	skin
9	chr4:149754000-149755800	Weak transcription	HMEC	breast
10	chr4:149754000-149755800	Weak transcription	NH-A	brain
11	chr4:149754000-149756000	Weak transcription	Osteobl	bone
12	chr4:149754000-149756200	Weak transcription	NHLF	lung
13	chr4:149754000-149758000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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