Variant report

Variant	rs4546689
Chromosome Location	chr8:49396724-49396725
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs1317527	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13250982	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13273913	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1502651	1.00[ASN][1000 genomes]
rs1510929	1.00[ASN][1000 genomes]
rs1510930	1.00[ASN][1000 genomes]
rs16937035	1.00[ASN][1000 genomes]
rs16937122	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16937172	1.00[ASN][1000 genomes]
rs17623020	1.00[ASN][1000 genomes]
rs34098567	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34634731	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35621163	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35687493	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36018304	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36084713	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56038738	0.93[ASN][1000 genomes]
rs6983842	1.00[ASN][1000 genomes]
rs6990374	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6991400	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6992602	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6996130	1.00[ASN][1000 genomes]
rs7002586	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7012795	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7013123	1.00[ASN][1000 genomes]
rs7013144	1.00[ASN][1000 genomes]
rs71511915	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73678289	1.00[ASN][1000 genomes]
rs7813928	0.93[ASN][1000 genomes]
rs7815397	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7815783	1.00[ASN][1000 genomes]
rs7819527	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7831832	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7838494	1.00[ASN][1000 genomes]
rs7843782	1.00[ASN][1000 genomes]
rs907177	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs955820	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9694327	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49390800-49398200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:49395000-49396800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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