Variant report

Variant	rs7012795
Chromosome Location	chr8:49385888-49385889
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49379288..49382130-chr8:49385329..49388085,3	MCF-7	breast:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs1317527	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13250982	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13273913	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1502651	1.00[ASN][1000 genomes]
rs1510929	1.00[ASN][1000 genomes]
rs1510930	1.00[ASN][1000 genomes]
rs16937035	1.00[ASN][1000 genomes]
rs16937122	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16937172	1.00[ASN][1000 genomes]
rs17623020	1.00[ASN][1000 genomes]
rs34098567	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34634731	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35621163	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35687493	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36018304	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36084713	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4546689	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56038738	0.93[ASN][1000 genomes]
rs6983842	1.00[ASN][1000 genomes]
rs6990374	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6991400	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6992602	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6996130	1.00[ASN][1000 genomes]
rs7002586	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7013123	1.00[ASN][1000 genomes]
rs7013144	1.00[ASN][1000 genomes]
rs7017418	1.00[CHB][hapmap]
rs71511915	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73678289	1.00[ASN][1000 genomes]
rs7813928	0.93[ASN][1000 genomes]
rs7815397	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7815783	1.00[ASN][1000 genomes]
rs7819527	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7831832	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7837292	1.00[CHB][hapmap]
rs7838494	1.00[ASN][1000 genomes]
rs7843782	1.00[ASN][1000 genomes]
rs907177	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs955820	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9694327	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49380200-49390400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:49380800-49386400	Weak transcription	Fetal Muscle Leg	muscle
3	chr8:49380800-49386400	Weak transcription	Pancreas	Pancrea
4	chr8:49382200-49387200	Enhancers	HMEC	breast
5	chr8:49383000-49386800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:49383400-49386800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr8:49383400-49387000	Enhancers	NHDF-Ad	bronchial
8	chr8:49383600-49386800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr8:49383800-49386000	Weak transcription	NHLF	lung
10	chr8:49384200-49386000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr8:49384600-49386000	Weak transcription	Osteobl	bone
12	chr8:49384600-49386200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr8:49384600-49386400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr8:49384600-49386800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr8:49384600-49387600	Weak transcription	Fetal Muscle Trunk	muscle
16	chr8:49385000-49386000	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr8:49385000-49386000	Weak transcription	HSMM	muscle
18	chr8:49385200-49386400	Weak transcription	NH-A	brain
19	chr8:49385200-49386400	Weak transcription	NHEK	skin
20	chr8:49385400-49386400	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr8:49385600-49386000	Enhancers	Placenta	Placenta
22	chr8:49385800-49386000	Flanking Active TSS	K562	blood
23	chr8:49385800-49386800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr8:49385800-49387000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr8:49385800-49387000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr8:49385800-49387000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr8:49385800-49387800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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