Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12051686	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12941985	0.87[AMR][1000 genomes]
rs1962808	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2159539	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2869590	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2869822	0.82[EUR][1000 genomes]
rs2869823	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2869824	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2869825	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2904204	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4790950	0.91[EUR][1000 genomes]
rs4790952	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6504291	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs718597	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7206992	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7208337	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7216343	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7217516	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7224599	0.82[EUR][1000 genomes]
rs7225676	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs8067633	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8075545	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8081577	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs875647	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9896306	0.82[EUR][1000 genomes]
rs9896684	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482610	chr17:63214370-63372334	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63274600-63282800	Weak transcription	NH-A	brain
2	chr17:63279600-63286800	Weak transcription	Right Atrium	heart
3	chr17:63280400-63282600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr17:63280400-63283000	Weak transcription	Osteobl	bone
5	chr17:63280600-63284800	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr17:63280600-63285400	Weak transcription	Stomach Mucosa	stomach
7	chr17:63280600-63285800	Weak transcription	HUVEC	blood vessel
8	chr17:63281000-63286200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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