Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr13:50468706-50468851	HepG2	liver:	n/a	n/a
2	MAX	chr13:50468636-50468898	NB4	blood:	n/a	chr13:50468735-50468745

Variant related genes	Relation type
RNY4P30	TF binding region

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11617754	0.86[CHB][hapmap]
rs2066549	1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2066557	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2066575	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2242482	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs2740524	1.00[CHB][hapmap];0.87[JPT][hapmap]
rs2740544	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs2740545	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs2760914	1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2803839	1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs2997624	0.82[ASN][1000 genomes]
rs4942899	0.86[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs4942901	0.90[ASN][1000 genomes]
rs7336058	0.96[ASN][1000 genomes]
rs7338055	0.94[ASN][1000 genomes]
rs790943	0.86[CHB][hapmap]
rs7986337	0.82[CHB][hapmap]
rs9535407	1.00[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs9568342	0.80[EUR][1000 genomes]
rs9568354	0.95[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs9568357	0.86[CHB][hapmap]
rs9568363	0.92[ASN][1000 genomes]
rs9568364	0.92[ASN][1000 genomes]
rs9568366	0.90[CHB][hapmap]
rs9596215	0.90[ASN][1000 genomes]
rs9596219	1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs9596220	1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3436655	chr13:50462077-50472044	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4548769	DLEU2///DLEU2L	trans	lymphoblastoid	RTeQTL
rs4548769	DLEU2L	cis	Lymphoblastoid	GTEx

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:50468200-50469600	Weak transcription	Placenta	Placenta
2	chr13:50468600-50486000	Weak transcription	Liver	Liver
3	chr13:50468800-50469000	Enhancers	HepG2	liver

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