The 2.0 version of rSNPBase

Variant report

Variant rs7338055
Chromosome Location chr13:50504226-50504227
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50479600-50508600 Weak transcription K562 blood
2 chr13:50480800-50508800 Weak transcription Fetal Brain Male brain
3 chr13:50481800-50509600 Weak transcription Right Ventricle heart
4 chr13:50482600-50509600 Weak transcription Primary B cells from cord blood blood
5 chr13:50484000-50509600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr13:50484400-50509400 Weak transcription Fetal Kidney kidney
7 chr13:50484600-50509600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr13:50485800-50506200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr13:50485800-50509200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr13:50486000-50509400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr13:50486400-50509600 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr13:50486600-50508800 Weak transcription Hela-S3 cervix
13 chr13:50487400-50509400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr13:50487600-50509400 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr13:50488400-50509600 Weak transcription Colonic Mucosa Colon
16 chr13:50489200-50509600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr13:50489200-50510000 Weak transcription Spleen Spleen
18 chr13:50490800-50506200 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr13:50491200-50507000 Weak transcription Brain Angular Gyrus brain
20 chr13:50492200-50504600 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr13:50492200-50509400 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr13:50492400-50509600 Weak transcription Primary T cells fromperipheralblood blood
23 chr13:50492600-50508800 Weak transcription HUVEC blood vessel
24 chr13:50492800-50509400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr13:50492800-50509600 Weak transcription Aorta Aorta
26 chr13:50493400-50509400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr13:50493800-50509600 Weak transcription Lung lung
28 chr13:50494200-50508800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr13:50494400-50508800 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr13:50495400-50509600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr13:50495800-50508400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr13:50495800-50508800 Weak transcription Brain Substantia Nigra brain
33 chr13:50495800-50508800 Weak transcription Fetal Brain Female brain
34 chr13:50495800-50508800 Weak transcription HepG2 liver
35 chr13:50496000-50506600 Weak transcription NHLF lung
36 chr13:50496000-50507000 Weak transcription Psoas Muscle Psoas
37 chr13:50497400-50509400 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr13:50497600-50505400 Strong transcription Skeletal Muscle Female skeletal muscle
39 chr13:50497600-50505800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr13:50497800-50504600 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr13:50497800-50505800 Strong transcription Placenta Placenta
42 chr13:50499000-50508800 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr13:50499000-50509400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr13:50499400-50506800 Weak transcription Brain Germinal Matrix brain
45 chr13:50499600-50509600 Weak transcription Esophagus oesophagus
46 chr13:50500000-50509400 Weak transcription Placenta Amnion Placenta Amnion
47 chr13:50500000-50509800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr13:50500400-50508800 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr13:50500400-50508800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr13:50500400-50508800 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015