The 2.0 version of rSNPBase

Variant report

Variant rs4548794
Chromosome Location chr14:55090804-55090805
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55057000-55091000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr14:55070400-55116200 Weak transcription HMEC breast
3 chr14:55073400-55091000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr14:55073800-55092000 Weak transcription Spleen Spleen
5 chr14:55074000-55091000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr14:55077600-55092000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr14:55078200-55091200 Weak transcription Rectal Smooth Muscle rectum
8 chr14:55078400-55091200 Weak transcription Fetal Stomach stomach
9 chr14:55078800-55094000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr14:55078800-55094000 Weak transcription HSMMtube muscle
11 chr14:55083400-55092000 Weak transcription Gastric stomach
12 chr14:55084600-55103000 Weak transcription NHEK skin
13 chr14:55084800-55091800 Weak transcription NH-A brain
14 chr14:55087200-55092000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr14:55087600-55094000 Enhancers NHLF lung
16 chr14:55087600-55094200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr14:55088400-55091800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr14:55089000-55093600 Enhancers HepG2 liver
19 chr14:55089200-55091400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr14:55089200-55091600 Weak transcription Osteobl bone
21 chr14:55089200-55094200 Enhancers Skeletal Muscle Female skeletal muscle
22 chr14:55089400-55091200 Weak transcription Muscle Satellite Cultured Cells --
23 chr14:55089400-55091400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr14:55089400-55091600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr14:55089600-55091600 Weak transcription Adipose Nuclei Adipose
26 chr14:55089600-55092000 Weak transcription Pancreas Pancrea
27 chr14:55089600-55092400 Enhancers A549 lung
28 chr14:55089600-55093000 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr14:55089600-55095400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr14:55089800-55091000 Weak transcription NHDF-Ad bronchial
31 chr14:55089800-55091200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr14:55089800-55092600 Enhancers Fetal Muscle Leg muscle
33 chr14:55089800-55092600 Weak transcription Lung lung
34 chr14:55089800-55094200 Weak transcription Ovary ovary
35 chr14:55090000-55091200 Weak transcription Colon Smooth Muscle Colon
36 chr14:55090000-55091200 Weak transcription Fetal Heart heart
37 chr14:55090000-55091200 Weak transcription Psoas Muscle Psoas
38 chr14:55090000-55092000 Weak transcription Aorta Aorta
39 chr14:55090000-55092000 Weak transcription Left Ventricle heart
40 chr14:55090000-55092000 Weak transcription Right Atrium heart
41 chr14:55090000-55092000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr14:55090000-55092600 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr14:55090000-55093000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr14:55090000-55093200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr14:55090000-55093400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr14:55090000-55093800 Weak transcription Primary B cells from peripheral blood blood
47 chr14:55090000-55093800 Weak transcription GM12878-XiMat blood
48 chr14:55090000-55094000 Weak transcription Primary T cells fromperipheralblood blood
49 chr14:55090000-55094200 Weak transcription Right Ventricle heart
50 chr14:55090000-55094600 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015