The 2.0 version of rSNPBase

Variant report

Variant rs56133056
Chromosome Location chr14:55088037-55088038
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55057000-55091000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr14:55070400-55116200 Weak transcription HMEC breast
3 chr14:55073400-55091000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr14:55073800-55092000 Weak transcription Spleen Spleen
5 chr14:55074000-55089400 Weak transcription Right Atrium heart
6 chr14:55074000-55089600 Weak transcription Fetal Muscle Trunk muscle
7 chr14:55074000-55089600 Weak transcription Stomach Smooth Muscle stomach
8 chr14:55074000-55091000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr14:55074200-55088600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr14:55077600-55092000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr14:55077800-55089200 Weak transcription Colon Smooth Muscle Colon
12 chr14:55078200-55088400 Weak transcription Adipose Nuclei Adipose
13 chr14:55078200-55091200 Weak transcription Rectal Smooth Muscle rectum
14 chr14:55078400-55088200 Weak transcription Placenta Amnion Placenta Amnion
15 chr14:55078400-55091200 Weak transcription Fetal Stomach stomach
16 chr14:55078800-55089400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr14:55078800-55094000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr14:55078800-55094000 Weak transcription HSMMtube muscle
19 chr14:55080000-55089200 Weak transcription Primary B cells from peripheral blood blood
20 chr14:55080200-55089200 Weak transcription Left Ventricle heart
21 chr14:55082000-55088400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr14:55082000-55089000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr14:55082000-55089000 Weak transcription Aorta Aorta
24 chr14:55082000-55089400 Weak transcription Lung lung
25 chr14:55083400-55089400 Weak transcription Right Ventricle heart
26 chr14:55083400-55092000 Weak transcription Gastric stomach
27 chr14:55084600-55103000 Weak transcription NHEK skin
28 chr14:55084800-55091800 Weak transcription NH-A brain
29 chr14:55085000-55088400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr14:55085000-55089400 Weak transcription Fetal Muscle Leg muscle
31 chr14:55086800-55089800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr14:55087200-55088200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr14:55087200-55092000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr14:55087400-55088400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr14:55087600-55089200 Enhancers Osteobl bone
36 chr14:55087600-55089600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr14:55087600-55090400 Enhancers HUVEC blood vessel
38 chr14:55087600-55094000 Enhancers NHLF lung
39 chr14:55087600-55094200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr14:55087800-55089400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr14:55088000-55088400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr14:55088000-55088400 Enhancers Psoas Muscle Psoas
43 chr14:55088000-55089000 Weak transcription Fetal Heart heart
44 chr14:55088000-55089000 Weak transcription HepG2 liver
45 chr14:55088000-55089400 Enhancers Muscle Satellite Cultured Cells --
46 chr14:55088000-55089400 Enhancers K562 blood
47 chr14:55088000-55089800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr14:55088000-55089800 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015