The 2.0 version of rSNPBase

Variant report

Variant rs55816518
Chromosome Location chr14:55078282-55078283
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55057000-55091000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr14:55067600-55080800 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr14:55070400-55116200 Weak transcription HMEC breast
4 chr14:55073400-55091000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr14:55073800-55080000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr14:55073800-55080200 Weak transcription A549 lung
7 chr14:55073800-55092000 Weak transcription Spleen Spleen
8 chr14:55074000-55081600 Weak transcription Psoas Muscle Psoas
9 chr14:55074000-55081600 Weak transcription Right Ventricle heart
10 chr14:55074000-55081600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr14:55074000-55081800 Weak transcription Lung lung
12 chr14:55074000-55084800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr14:55074000-55089400 Weak transcription Right Atrium heart
14 chr14:55074000-55089600 Weak transcription Fetal Muscle Trunk muscle
15 chr14:55074000-55089600 Weak transcription Stomach Smooth Muscle stomach
16 chr14:55074000-55091000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr14:55074200-55088600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr14:55076200-55078400 Enhancers Muscle Satellite Cultured Cells --
19 chr14:55076200-55084800 Weak transcription Fetal Muscle Leg muscle
20 chr14:55076400-55078800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
21 chr14:55076400-55082800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr14:55076600-55078400 Enhancers Placenta Amnion Placenta Amnion
23 chr14:55076600-55078400 Enhancers HSMM muscle
24 chr14:55076600-55079000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr14:55076600-55087600 Weak transcription HUVEC blood vessel
26 chr14:55077000-55078400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr14:55077000-55078800 Enhancers HSMMtube muscle
28 chr14:55077200-55078400 Enhancers NH-A brain
29 chr14:55077200-55078600 Enhancers Brain Anterior Caudate brain
30 chr14:55077200-55079600 Enhancers NHLF lung
31 chr14:55077400-55079000 Enhancers Osteobl bone
32 chr14:55077400-55080800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr14:55077600-55078400 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr14:55077600-55079400 Enhancers Brain Substantia Nigra brain
35 chr14:55077600-55080400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr14:55077600-55084000 Weak transcription NHEK skin
37 chr14:55077600-55092000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr14:55077800-55078400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr14:55077800-55078400 Enhancers Ovary ovary
40 chr14:55077800-55082000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr14:55077800-55089200 Weak transcription Colon Smooth Muscle Colon
42 chr14:55078000-55078600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr14:55078000-55078800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr14:55078000-55080200 Enhancers Left Ventricle heart
45 chr14:55078000-55080400 Enhancers HepG2 liver
46 chr14:55078200-55078400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr14:55078200-55078400 Enhancers Fetal Stomach stomach
48 chr14:55078200-55078600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr14:55078200-55078800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr14:55078200-55079000 Enhancers NHDF-Ad bronchial

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015