The 2.0 version of rSNPBase

Variant report

Variant rs61975126
Chromosome Location chr14:55072926-55072927
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55036200-55073000 Weak transcription Pancreas Pancrea
2 chr14:55057000-55091000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr14:55058200-55073000 Weak transcription Brain Substantia Nigra brain
4 chr14:55058800-55073000 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr14:55059200-55073000 Weak transcription Spleen Spleen
6 chr14:55061200-55073000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr14:55064800-55078000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr14:55066000-55073400 Enhancers Fetal Heart heart
9 chr14:55067000-55073000 Weak transcription Adipose Nuclei Adipose
10 chr14:55067000-55078000 Weak transcription Fetal Stomach stomach
11 chr14:55067200-55073000 Weak transcription A549 lung
12 chr14:55067200-55078000 Weak transcription Fetal Lung lung
13 chr14:55067400-55073600 Weak transcription HepG2 liver
14 chr14:55067600-55073400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr14:55067600-55080800 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr14:55067800-55073000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr14:55067800-55073000 Weak transcription Aorta Aorta
18 chr14:55067800-55073000 Weak transcription Ovary ovary
19 chr14:55069600-55073600 Enhancers Osteobl bone
20 chr14:55069600-55074000 Enhancers Skeletal Muscle Female skeletal muscle
21 chr14:55069600-55074400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr14:55070400-55073000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr14:55070400-55073000 Weak transcription Right Ventricle heart
24 chr14:55070400-55116200 Weak transcription HMEC breast
25 chr14:55070600-55073000 Weak transcription Left Ventricle heart
26 chr14:55070800-55073000 Enhancers Colon Smooth Muscle Colon
27 chr14:55071000-55073200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr14:55071200-55073000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr14:55071600-55073400 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr14:55072000-55074200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr14:55072000-55074200 Enhancers Rectal Smooth Muscle rectum
32 chr14:55072200-55073000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr14:55072200-55074000 Enhancers NHEK skin
34 chr14:55072200-55076000 Weak transcription HUVEC blood vessel
35 chr14:55072600-55073000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr14:55072600-55073400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr14:55072600-55073400 Flanking Active TSS NHDF-Ad bronchial
38 chr14:55072600-55073600 Enhancers Skeletal Muscle Male skeletal muscle
39 chr14:55072600-55073600 Enhancers HSMM muscle
40 chr14:55072600-55073600 Enhancers HSMMtube muscle
41 chr14:55072600-55073800 Enhancers Duodenum Smooth Muscle Duodenum
42 chr14:55072600-55074000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr14:55072600-55074000 Enhancers Placenta Amnion Placenta Amnion
44 chr14:55072600-55074000 Enhancers NH-A brain
45 chr14:55072800-55073000 Flanking Active TSS Brain Hippocampus Middle brain
46 chr14:55072800-55073200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
47 chr14:55072800-55073200 Enhancers Gastric stomach
48 chr14:55072800-55073200 Flanking Active TSS Stomach Smooth Muscle stomach
49 chr14:55072800-55073200 Genic enhancers NHLF lung
50 chr14:55072800-55073400 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015