Variant report

Variant	rs4680064
Chromosome Location	chr3:150649821-150649822
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs13092829	1.00[ASN][1000 genomes]
rs13322794	1.00[ASN][1000 genomes]
rs1456131	1.00[ASN][1000 genomes]
rs35096827	1.00[ASN][1000 genomes]
rs4680068	1.00[ASN][1000 genomes]
rs6764540	1.00[ASN][1000 genomes]
rs6773020	1.00[ASN][1000 genomes]
rs6806039	1.00[ASN][1000 genomes]
rs73153836	1.00[ASN][1000 genomes]
rs73155751	1.00[ASN][1000 genomes]
rs73155773	1.00[ASN][1000 genomes]
rs7614811	1.00[ASN][1000 genomes]
rs9818251	1.00[ASN][1000 genomes]
rs9854126	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915879	chr3:150607390-150860207	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150648000-150650200	Enhancers	Brain Germinal Matrix	brain
2	chr3:150649400-150650200	Enhancers	Fetal Muscle Leg	muscle
3	chr3:150649800-150651000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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