Variant report
| Variant | rs73155751 |
|---|---|
| Chromosome Location | chr3:150767570-150767571 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:29)
| rs_ID | r2[population] |
|---|---|
| rs10513387 | 1.00[ASN][1000 genomes] |
| rs13092829 | 1.00[ASN][1000 genomes] |
| rs13322794 | 1.00[ASN][1000 genomes] |
| rs1456131 | 1.00[ASN][1000 genomes] |
| rs1549829 | 1.00[ASN][1000 genomes] |
| rs1554120 | 1.00[ASN][1000 genomes] |
| rs17290219 | 1.00[ASN][1000 genomes] |
| rs17304673 | 1.00[ASN][1000 genomes] |
| rs1920393 | 1.00[ASN][1000 genomes] |
| rs35096827 | 1.00[ASN][1000 genomes] |
| rs4680064 | 1.00[ASN][1000 genomes] |
| rs4680068 | 1.00[ASN][1000 genomes] |
| rs6764540 | 1.00[ASN][1000 genomes] |
| rs6773020 | 1.00[ASN][1000 genomes] |
| rs6806039 | 1.00[ASN][1000 genomes] |
| rs722133 | 1.00[ASN][1000 genomes] |
| rs73153836 | 1.00[ASN][1000 genomes] |
| rs73155773 | 1.00[ASN][1000 genomes] |
| rs7614811 | 1.00[ASN][1000 genomes] |
| rs9817216 | 1.00[ASN][1000 genomes] |
| rs9818251 | 1.00[ASN][1000 genomes] |
| rs9821749 | 1.00[ASN][1000 genomes] |
| rs9821937 | 1.00[ASN][1000 genomes] |
| rs9836053 | 1.00[ASN][1000 genomes] |
| rs9850762 | 1.00[ASN][1000 genomes] |
| rs9854017 | 1.00[ASN][1000 genomes] |
| rs9854126 | 1.00[ASN][1000 genomes] |
| rs9871229 | 1.00[ASN][1000 genomes] |
| rs9881116 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv915879 | chr3:150607390-150860207 | Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
| 2 | nsv829756 | chr3:150692636-150889738 | Weak transcription Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:150766000-150769600 | Weak transcription | Fetal Intestine Small | intestine |
