Variant report

Variant	rs4680332
Chromosome Location	chr3:156753029-156753030
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156747508..156749821-chr3:156752380..156754095,2	K562	blood:
2	chr3:156748321..156750998-chr3:156751698..156754095,2	K562	blood:

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1032041	0.90[ASW][hapmap];0.83[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1032044	0.88[JPT][hapmap]
rs10936054	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs10936055	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs11715321	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs11720579	0.83[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12636394	0.85[ASN][1000 genomes]
rs12636741	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12638952	0.84[ASN][1000 genomes]
rs13082176	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1384541	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1482854	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1482855	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1482856	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1482857	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1482859	0.83[ASN][1000 genomes]
rs1482866	0.83[ASN][1000 genomes]
rs1600978	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1842840	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2046269	1.00[JPT][hapmap]
rs2046270	0.87[ASN][1000 genomes]
rs2128535	0.94[JPT][hapmap]
rs2220051	0.84[ASN][1000 genomes]
rs28564228	0.85[ASN][1000 genomes]
rs35354535	0.87[ASN][1000 genomes]
rs35626159	0.86[ASN][1000 genomes]
rs4263246	1.00[JPT][hapmap]
rs4680337	0.88[JPT][hapmap]
rs6799034	0.83[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7612970	0.88[JPT][hapmap]
rs7616314	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7624328	0.88[JPT][hapmap]
rs7637445	0.87[ASN][1000 genomes]
rs931245	0.81[ASN][1000 genomes]
rs9811993	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs9812759	0.94[JPT][hapmap]
rs9818123	0.84[ASN][1000 genomes]
rs9818500	0.83[ASN][1000 genomes]
rs9818874	0.87[ASN][1000 genomes]
rs9829685	0.82[JPT][hapmap]
rs9859727	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9867766	1.00[JPT][hapmap];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349885	chr3:156685409-156878910	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	141 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156751400-156761200	Weak transcription	Colon Smooth Muscle	Colon

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