Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11132951	0.87[CEU][hapmap]
rs11132952	0.92[CEU][hapmap]
rs1158684	0.84[CEU][hapmap]
rs12503858	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12642131	0.92[CEU][hapmap]
rs12647340	0.81[CEU][hapmap]
rs12649426	0.81[CEU][hapmap]
rs13123441	0.87[EUR][1000 genomes]
rs13124556	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13144240	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13146563	0.81[CEU][hapmap]
rs1347700	0.81[CEU][hapmap]
rs1437834	0.80[CEU][hapmap]
rs1540470	0.81[CEU][hapmap]
rs17234582	0.88[EUR][1000 genomes]
rs17307651	0.88[CEU][hapmap]
rs17308839	0.84[CEU][hapmap]
rs17308944	0.85[CEU][hapmap]
rs1898554	0.85[CEU][hapmap]
rs35640087	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4476577	0.88[CEU][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4692921	0.88[EUR][1000 genomes]
rs4695771	0.88[CEU][hapmap]
rs6822571	0.92[CEU][hapmap]
rs6855645	0.88[CEU][hapmap]
rs6858309	0.87[CEU][hapmap]
rs748347	0.82[CEU][hapmap]
rs7658615	0.92[CEU][hapmap]
rs7659511	0.81[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031592	chr4:173112542-173662991	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv537359	chr4:173112542-173662991	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv534293	chr4:173121379-173606082	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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