Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10516397	0.82[EUR][1000 genomes]
rs10938853	0.91[EUR][1000 genomes]
rs11735616	0.90[EUR][1000 genomes]
rs1459282	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1459283	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1503978	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1983082	0.82[EUR][1000 genomes]
rs1983083	0.83[EUR][1000 genomes]
rs4235290	0.83[EUR][1000 genomes]
rs4235291	0.90[EUR][1000 genomes]
rs4256212	0.88[EUR][1000 genomes]
rs4337724	0.92[EUR][1000 genomes]
rs4359890	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4469066	0.83[EUR][1000 genomes]
rs4507349	0.88[EUR][1000 genomes]
rs4585286	0.83[EUR][1000 genomes]
rs4621420	0.83[EUR][1000 genomes]
rs4697234	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6850480	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6851124	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7669340	0.89[EUR][1000 genomes]
rs7676963	0.83[EUR][1000 genomes]
rs9291429	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21699600-21708400	Weak transcription	Brain Anterior Caudate	brain

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