Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10516397	0.88[CEU][hapmap];0.91[EUR][1000 genomes]
rs10938853	0.82[EUR][1000 genomes]
rs11735616	0.81[EUR][1000 genomes]
rs13127601	0.87[EUR][1000 genomes]
rs1459282	1.00[CEU][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.94[JPT][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1459283	1.00[CEU][hapmap];0.90[CHD][hapmap];0.86[GIH][hapmap];0.93[JPT][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1503978	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1983082	0.88[EUR][1000 genomes]
rs1983083	0.89[EUR][1000 genomes]
rs4235290	0.89[EUR][1000 genomes]
rs4235291	0.88[CEU][hapmap];0.93[TSI][hapmap];0.81[EUR][1000 genomes]
rs4256212	0.94[EUR][1000 genomes]
rs4337724	0.82[EUR][1000 genomes]
rs4359890	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4469066	0.89[EUR][1000 genomes]
rs4507349	0.96[CEU][hapmap];0.94[EUR][1000 genomes]
rs4585286	0.89[EUR][1000 genomes]
rs4621420	0.91[CEU][hapmap];0.89[EUR][1000 genomes]
rs4697233	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4697234	1.00[CEU][hapmap];0.80[CHB][hapmap];0.94[JPT][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6850480	0.96[CEU][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.88[MKK][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6851124	0.87[AMR][1000 genomes]
rs7669340	0.82[EUR][1000 genomes]
rs7676963	0.96[CEU][hapmap];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829880	chr4:21492426-21693816	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21681800-21693800	Weak transcription	Colon Smooth Muscle	Colon
2	chr4:21693600-21694600	Enhancers	Fetal Lung	lung

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