Variant report

Variant	rs4715515
Chromosome Location	chr6:54968444-54968445
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10948880	0.81[AMR][1000 genomes]
rs11754240	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11756900	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12664361	0.85[AMR][1000 genomes]
rs13192291	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13208701	0.82[AMR][1000 genomes]
rs171224	0.93[CHB][hapmap];0.91[JPT][hapmap]
rs1963697	0.87[CHB][hapmap]
rs2207025	0.86[CHB][hapmap];0.91[JPT][hapmap]
rs239790	0.93[CHB][hapmap];0.90[JPT][hapmap]
rs239794	0.86[CHB][hapmap]
rs239796	0.93[CHB][hapmap];0.90[JPT][hapmap]
rs239801	0.93[CHB][hapmap];0.91[JPT][hapmap]
rs239815	0.86[CHB][hapmap]
rs421957	0.86[CHB][hapmap]
rs4515389	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4588693	0.81[AMR][1000 genomes]
rs4712082	0.86[CHB][hapmap]
rs6908568	0.81[AMR][1000 genomes]
rs6926997	0.87[CHB][hapmap];0.91[JPT][hapmap]
rs7761568	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7761785	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7766546	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8180551	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9349740	0.87[CHB][hapmap];0.91[JPT][hapmap]
rs9349753	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9357840	0.91[CEU][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9367607	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9370345	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs9370371	0.85[AMR][1000 genomes]
rs9370388	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9382403	0.87[CHB][hapmap];0.91[JPT][hapmap]
rs9382440	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9382452	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9396034	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9396036	0.87[CEU][hapmap];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9464182	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9475130	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54964600-54973000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr6:54965000-54971000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr6:54965400-54971000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr6:54965800-54971000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr6:54966400-54971000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr6:54966400-54973200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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