Variant report

Variant	rs8180551
Chromosome Location	chr6:55005591-55005592
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10948880	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11754240	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11756900	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12664361	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13192291	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13208701	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4515389	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4588693	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4712092	0.86[CHB][hapmap]
rs4715515	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6908568	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7761568	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7761785	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9349753	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9357840	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9367607	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9367608	0.87[CHB][hapmap]
rs9370371	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9370388	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9382440	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9382442	0.86[CHB][hapmap]
rs9382452	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9396034	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9396036	0.95[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9464182	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9475130	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:55005400-55009600	Weak transcription	HUES48 Cell Line	embryonic stem cell

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