Variant report

Variant	rs4715874
Chromosome Location	chr6:14020815-14020816
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:14008164..14010446-chr6:14020010..14022121,2	K562	blood:
2	chr6:14019239..14021788-chr6:14024772..14026688,2	K562	blood:
3	chr6:14016910..14018943-chr6:14020020..14021629,2	K562	blood:
4	chr6:14018343..14023013-chr6:14024168..14030575,8	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1016111	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10456193	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10949196	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12154001	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12154004	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12154107	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12154108	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1970012	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1997681	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1999198	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35314198	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4712220	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4715870	0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4715871	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4715872	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4715873	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6912313	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6913804	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6930272	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6936037	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6939259	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6941760	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7741855	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7754095	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9349919	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9367802	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9367803	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9367805	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9367807	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9370694	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9382890	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9396425	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9476419	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:14016800-14021200	Weak transcription	K562	blood
2	chr6:14018000-14027200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr6:14018200-14024200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr6:14018200-14025800	Weak transcription	Fetal Brain Female	brain
5	chr6:14018600-14023800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr6:14018600-14024000	Weak transcription	Pancreas	Pancrea
7	chr6:14018600-14024600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr6:14020400-14021000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr6:14020400-14021400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr6:14020400-14021600	Enhancers	Fetal Brain Male	brain
11	chr6:14020600-14021200	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr6:14020600-14021400	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr6:14020600-14021600	Enhancers	H9 Cell Line	embryonic stem cell
14	chr6:14020600-14021800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr6:14020600-14021800	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr6:14020600-14021800	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr6:14020800-14021000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr6:14020800-14021600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr6:14020800-14021800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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